CX046848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Physcomitrella patens GN=ndhB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVF--IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +SL+ + W PD+YEGSPTPV AFLS+A KI+ A + R+F ++ + +I SMILG L A+ QT +KR+LA+SSI +GY+ G G +G S+++ + Y M + FA I+L +T I D L +P+ + ++ + S GIPPL+GF K YLF+ A G YFL +G+ TSVI Sbjct: 227 LSLVPFHQWTPDVYEGSPTPVVAFLSVASKIAGLALLVRLFNIVFPFLPNQWHSLLEISAICSMILGNLVAITQTSMKRMLAYSSISQIGYLMIGLVTGNFDGYTSMIVYLLFYIFMNLGTFACIILFGLRTGTDNIRDYSGLILKDPLLTFSLALCLLSLGGIPPLSGFFGKLYLFWCAWKTGLYFLVFIGLFTSVI 424
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_PROMM (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhB PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 I+ + + W PD+YEGSPTPV AFLS+ K + A R+ + +G++ + +F ++ SM LG + A+AQT +KR+LA+SSIG G++ G CGT +G ++++ + Y M + AFA I+L +T I+D L + +P+ + S+ + S GIPP+ GF K YLFFA Y L VG+VTSV+ Sbjct: 238 IAAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALALRLLVGCFGAFDNQWKLLFTVLAVLSMTLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDRISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVVGLVTSVV 435
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_PROM3 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhB PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 I+ + + W PD+YEGSPTPV AFLS+ K + A R+ + +G++ + +F ++ SM LG + A+AQT +KR+LA+SSIG G++ G CGT +G ++++ + Y M + AFA I+L +T I+D L + +P+ + S+ + S GIPP+ GF K YLFFA Y L VG+VTSV+ Sbjct: 238 IAAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALALRLLVGCFGAFDNQWKLLFTVLAVLSMTLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDRISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVVGLVTSVV 435
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_ACAM1 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 1 Query: 19 SLSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIA--SMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAF-AIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 S+S I+ + + W PD+YEGSPTPV AFLS+ K + A R+ Q F F ++A SM+LG + A+AQT +KR+LA+SSIG G++ G GT G S++ + IY M + AF ++L +T I D L +P+ + S+ + S GIPPLAGF K YLF+A GAY L +G++TSV+ Sbjct: 220 SVSFKIAAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLTQAFPNLVEQWQFIFTALAILSMVLGNVVAIAQTSMKRMLAYSSIGQAGFVMIGLVIGTEAGYASMVFYLLIYLFMNLGAFTCVILFSLRTGTDEIGDYAGLYLKDPLLTLALSLCLLSLGGIPPLAGFFGKLYLFWAGWQAGAYGLVLLGLITSVV 422
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_NUPAD (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Nuphar advena GN=ndhB2 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.827e-34 Identity = 81/199 (40.70%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +S + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P SA++ ++ + S GIPPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFSALSSALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_NUPAD (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Nuphar advena GN=ndhB1 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.827e-34 Identity = 81/199 (40.70%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +S + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P SA++ ++ + S GIPPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFSALSSALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_SYNY3 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=ndhB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIA--SMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 IS + + W PD+YEGSPTPV AFLS+ K + A R+ + G T + F ++A SM+LG + A+AQT +KR+LA+SSIG G++ G G+ +G S++ + IY M + AF+ I+L +T I+D L +P+ + SI + S GIPPLAGF K Y+F+A G Y L +G+VTSV+ Sbjct: 229 ISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFAVAIRLLVTAFGGITDEWHVIFTALAVLSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGSEDGYASMVFYMLIYLFMNLGAFSCIILFTLRTGSDQISDYAGLYHKDPLLTLGLSICLLSLGGIPPLAGFFGKIYIFWAGWQSGLYGLVLLGLVTSVV 426
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_PAUCH (NAD(P)H-quinone oxidoreductase subunit 2, organellar chromatophore OS=Paulinella chromatophora GN=ndhB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 74/198 (37.37%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 I+ + + W PD+YEG+PTP+ AFLS+ K + A R+ + + S+ + +F +I SM+LG + A++QT +KR+LA+SSIG G++ G CGT +G ++++ + Y M + AFA ++L +T IAD L + +P+ I S+ + S GIPP+ GF K YLFFA Y L G++TSV+ Sbjct: 225 IAAVPFHQWTPDVYEGAPTPIVAFLSVGSKTAGFALALRLLVGCFESFDIQWKFLFSLLAILSMVLGNIVALSQTSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMILYLATYLFMNMGAFACVILFSIRTGSDLIADYAGLYQKDPLVTIGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVTGLITSVV 422
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_CHLAD (NADH-quinone oxidoreductase subunit N OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=nuoN PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 84/207 (40.58%), Postives = 120/207 (57.97%), Query Frame = 1 Query: 19 SLSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ----IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFS-CGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + S ++L +MW PD+YEGSPTPV AF+S+ K A + R+ G TL + + + +M++G L A+AQT VKR+LA+SSIGH GY+ G G G ++ L + +YAL + AFA+++AL + D L + P+ A+ +I MFS AG+PP+AGF +KFY AA G +LA VGVVTS I Sbjct: 222 AFSFKVALAPFHMWTPDVYEGSPTPVAAFMSVGTKGGALAALVRLLFEGL--PTLNEYWLPVLAGLTALTMVVGNLGAVAQTNVKRMLAYSSIGHAGYVMLGVMVAGEQRGPEAFLFYMLVYALSNLGAFAVLIALEHQGENAWRLDDFAGLYQRQPLLAVAMAIFMFSLAGVPPMAGFMAKFYALTAAWEGGLPWLALVGVVTSAI 426
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2M_METSE (NADH-ubiquinone oxidoreductase chain 2 OS=Metridium senile GN=ND2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.226e-34 Identity = 71/195 (36.41%), Postives = 118/195 (60.51%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +S +MWAPD+Y+G+PT TA L+ PK+ + + + + + + +I SM++GAL A+ QTK+KRLLA+S I H+G++ G GT E +Q+ LI + +Y +M++ AFA+VLAL + I + L++ P AIT ++T S AG+PPL GF SK+++ + + Y ++ + V+ SV+ Sbjct: 129 LSAAPFHMWAPDVYDGAPTTTTALLATVPKVGVFSILVSI-------GPVANVLLIATIFSMVVGALGALNQTKIKRLLAYSGIAHMGFVLWGIEIGTFESVQASLIYMILYVIMSVCAFAMVLALGGLK-NLIVEFSGLSRKEPALAITLALTFLSIAGVPPLIGFFSKWWILLSGITYQYYLVSILAVICSVV 315 The following BLAST results are available for this feature:
BLAST of CX046848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046848 ID=CX046848; Name=CX046848; organism=Citrus sinensis; type=EST; length=656bpback to top |