CX046848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: MNHD2_STAA1 (Putative antiporter subunit mnhD2 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mnhD2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14 Identity = 54/204 (26.47%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 43 LTLYMWAPDIYEGSPTPVTA-FLSIAPKISISANISRVF--IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQ-TRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 642 L L+MW P Y T + A F ++ K+ A I R F ++ + + + + +M++GA+ +A +K++ A+ I +G+I G T GI + + ++ F I+ +L T + L LAK P+ + F I +F+ G+PP +GF K +F AL G Y + ++TS+I ++ R+ Sbjct: 223 LVLFMWLPKAYAVLNTELAALFAALMTKVGAYALI-RFFTLLFDQHNDLIHPLLATMAAITMVIGAIGVIAYKDIKKIAAYQVIISIGFIILGLGTNTFAGINGAIFYLVNDIVVKTLLFFIIGSLVYITGYRQYQYLNGLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGKVLIFQGALQNGNYIGLALMIITSLIAMYSLFRI 425
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUOM_RICFE (NADH-quinone oxidoreductase subunit M OS=Rickettsia felis GN=nuoM PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 61/226 (26.99%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 16 PSLSGSISLLT--LYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI-------YGSYG---------ATLQQIF----FFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLAL-RQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKF--YLFFAALGCGAYFLAPVGVVTSVI 618 P L+G+I L T + WA I P+ F + P + A S I +G YG +++ Q F + S+ ++I +L A+AQ +K+++A+SSI H+GY+ G T G+ + + + +++ F IV L + K IA G +A P+ A F I M G+P +GF +F L + A F+A +G++ + Sbjct: 203 PELTGNIPLFTQQILWWAIFIAFAVKIPIIPFHTWLPDAHVQAPTSGSVILAGILLKFGGYGFLRVLLPLFSSVSQEFAIYVIYLSVIAIIYASLVALAQKDMKKMIAYSSIAHMGYVTIGIFSFTEAGVSGAIFQMLSHGVISSCLFLIVGTLYERLHTKEIAKYGGVASKMPVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYKVNVIATFIAALGIILGAV 428
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON_SALTO (NADH-quinone oxidoreductase subunit N OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=nuoN PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 59/215 (27.44%), Postives = 100/215 (46.51%), Query Frame = 1 Query: 22 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYI------------RTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVK--YIADLGALAKTNPISAITFSITMFSYAGIPP-LAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIG 621 L+ ++ + + WAP Y+G+P PV A+LS K+ + V + + ++ +M +G L A+ Q + RLLA SS+ GYI RTG + + + + ++ + AFA V+ALR + +L A+ P +A+ ++ + AG+PP LAG +K + + L GA LA V V +V+G Sbjct: 222 LTVKVAAVPFHAWAPTTYDGAPLPVAAYLSTVSKLGGVVALLAVVQHALPAQITGLVLALLAVLTMTVGNLVALRQRRTVRLLAWSSVAQAGYILAPLGALALAAGRTGDA--RAAAYAAAVAYTVFFVVLELAAFAAVVALRPAGADGGTLDELRGAARRRPWAAVGLALALVGLAGLPPGLAGLFAKVTVVRSLLDGGAAGLALVVAVNAVLG 434
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON2_STRGG (NADH-quinone oxidoreductase subunit N 2 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 58/201 (28.86%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPK-ISISANI-SRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVK-----RLLAHSSIGHVGYIRTGFSCGTI---EGIQSLLIGIFIYALMTIDAFAIVLALRQTRV-KYIADLGALAKTNPISAITFSITMFSYAGIPP-LAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD Y G+P P+ A+LS+ K + S I V + SY + +M G +AA+ Q + RLLA SS+ GY+ + + I S + +YA++ + AFA+ + +T + D L T P++A+ + AG+PP + G +K +F AA+ G +LA V V VI Sbjct: 258 HFWVPDTYVGAPLPIAAYLSVVGKAVGFSGLILVTVVAFPSYADVWGPALAVLAALTMTAGNVAALRQNAARARSAVRLLAWSSVAQAGYLLVPIAAAAYSSDDQIGSTVAYALMYAVVNLGAFAVAAVVARTHPGNRLTDYRGLYATRPLAALALGFFLLCLAGLPPGIIGLFAKVTVFSAAVDAGLGWLAVVMAVNVVI 458
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU5C_LIGVU (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Ligustrum vulgare GN=ndhF PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 57/177 (32.20%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 49 LYMWAPDIYEGSPTPVTAFLS----IAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTI-EGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAD-------LGALAKTNPISAITFSITMFSYAGIPPLAGFCSK 543 L++W PD EG PTP++A + +A I + A + +FI Y + F I +++LGA A+AQ +KR LA+S++ +GY+ G+ + L+ + AL+ + + +I+ ++ +T V Y D +G L K PI+ I+F + S GIPPLA F SK Sbjct: 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPY---IMNFISFIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSM-ETIVGYSPDKSQNMVLMGGLRKHVPITQISFLLGTLSLCGIPPLACFWSK 417
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUOM_RICTY (NADH-quinone oxidoreductase subunit M OS=Rickettsia typhi GN=nuoM PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.456e-14 Identity = 56/210 (26.67%), Postives = 98/210 (46.67%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLS-----------IAPKISISANISRVF-IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLAL-RQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKF--YLFFAALGCGAYFLAPVGVVTSVI 618 I ++ + W PD + +PT + L+ + + + N+S+ F IY Y S+ ++I +L A+AQ +K+++A+SSI H+GY+ G T GI + + + +++ F IV L + K IA G +A P+ A F ITM S G+P +GF +F L + A +A +G++ + Sbjct: 230 IPMIPFHTWLPDAHVQAPTSGSVILAGILLKLGSYGFLRVLLPLLPNVSQEFAIYVIY----------LSVIAIIYSSLVALAQKDIKQMIAYSSIAHMGYVTIGIFSFTETGISGAIFQMLSHGVVSSSLFLIVGTLYERLHTKEIAKYGGVASKMPVLATFFMITMLSSIGLPSTSGFIGEFLSLLGIYKVNVVAACIAALGIILGAV 429
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU5C_DIOEL (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Dioscorea elephantipes GN=ndhF PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 60/199 (30.15%), Postives = 97/199 (48.74%), Query Frame = 1 Query: 49 LYMWAPDIYEGSPTPVTAFLS----IAPKISISANISRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAD-------LGALAKTNPISAITFSITMFSYAGIPPLAGFCSK------FYLFFAALGCGAYFLA 591 L++W PD EG PTP++A + +A I + A + +FI Y + + I +++LGA A+AQ +KR LA+S++ +GYI G+ + L+ + AL+ + + +I+ ++ V Y D +G L K P++ TF + S GIPPLA F SK +L+ AYF A Sbjct: 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLRPLFIVIPY---IMNLISLIGIITLLLGATLALAQGDIKRSLAYSTVSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSMEPV-VGYSPDKSQNMVLMGGLKKYVPVTRTTFLLGTLSLCGIPPLACFWSKDEILTDSWLYSPIFAIIAYFTA 439
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2M_PICCA (NADH-ubiquinone oxidoreductase chain 2 OS=Pichia canadensis GN=ND2 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 57/222 (25.68%), Postives = 103/222 (46.40%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIY------------GSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGY----IRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLA-----------LRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 I +Y W+ +Y S T +T+++S+ PKISI + I + + + L I I S+I+G++ + Q K+K +LA+S + ++GY I + + I I + +I I Y I F +++ + + YI +L + K N I + S+ GIPPL GF K+YL +++ FL+ + +++S+I Sbjct: 251 IGAAPMYNWSILLYSNSNTIITSYISLIPKISILSYILLIILNLYNLNNLNNLFNNNNNNNLIYILSIIIILSLIIGSIGGLTQIKIKNILAYSGLLNIGYFLLIILSLINNNNINSILAYIIYITQYCFNHISIFILLIIAIIYNNNYNNFITNKNLIYIYELNYI-KNNRYLIFCLIIIIGSFIGIPPLFGFYGKYYLLISSINSNYLFLSLLLIISSII 471
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: MNHD1_STAAW (Na(+)/H(+) antiporter subunit D1 OS=Staphylococcus aureus (strain MW2) GN=mnhD1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 49 LYMWAPDIYEGSPTPVTAFL-SIAPKISISANISRVFIYGSYGATLQQ-IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYAL--MTIDAFAIVLALRQTRVKYIADL---GALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 642 +++W P Y P P+ AF ++ K+ + A + ++ S + + F ++ ++I G + A+A +K+++ ++ + VG I G + T G +IG Y L M + +L ++ ADL G L K P+ +F I S AGIPPL+GF KF++ + G Y + +++S++ ++ R+ Sbjct: 229 MFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESG----MIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRI 429
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: MNHD1_STAAU (Na(+)/H(+) antiporter subunit D1 OS=Staphylococcus aureus GN=mnhD1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 49 LYMWAPDIYEGSPTPVTAFL-SIAPKISISANISRVFIYGSYGATLQQ-IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYAL--MTIDAFAIVLALRQTRVKYIADL---GALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRL 642 +++W P Y P P+ AF ++ K+ + A + ++ S + + F ++ ++I G + A+A +K+++ ++ + VG I G + T G +IG Y L M + +L ++ ADL G L K P+ +F I S AGIPPL+GF KF++ + G Y + +++S++ ++ R+ Sbjct: 229 MFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESG----MIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRI 429 The following BLAST results are available for this feature:
BLAST of CX046848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046848 ID=CX046848; Name=CX046848; organism=Citrus sinensis; type=EST; length=656bpback to top |