CX046848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_IPOPU (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Ipomoea purpurea GN=ndhB1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 79/193 (40.93%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + AFA IVL +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGAFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVFIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON1_ACIBL (NADH-quinone oxidoreductase subunit N 1 OS=Acidobacteria bacterium (strain Ellin345) GN=nuoN1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 80/206 (38.83%), Postives = 122/206 (59.22%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG----TIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRV--KYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRW 627 I+ + + WAPD YEG+PT VT F+S+A K + A + R+F++ + Q I F ++A+MI G AA+ QT VKRLLA+SSI HVGY+ G + GI+ +L+ + +Y M + AFA++ +LR+ + + DL L P A+ + + S AGIPPLAGF K+Y+F + + G Y LA V V+ +V+G + Sbjct: 238 IAAVPFHQWAPDAYEGAPTAVTGFMSVAVKAAGWAMLLRIFLFMLWPMREQYTPILIFVAVATMIGGNFAALTQTNVKRLLAYSSISHVGYMLLGLVASDGKNSSTGIKGILVYLAVYTFMNLGAFAVITSLRRRDIIGDELDDLAGLFFKAPSEAVLLLVFLLSLAGIPPLAGFWGKYYIFLSLMETGHYTLAVVAVLFAVLGMY 443
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_SYNP2 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISR--VFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAF-AIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 IS + + W PD+YEGSPTPV AFLS+ K + A R V ++ IF +I SM+LG + A+AQT +KR+LA+SSI G++ G GT G S++ + +Y M + AF ++L +T IA+ L + +P+ + S+ + S GIPPLAGF K YLF+A G Y L +G++TSVI Sbjct: 228 ISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTVFNPVSEEWHFIFTALAILSMVLGNVVALAQTSMKRMLAYSSIAQAGFVMIGLVAGTDAGYSSVIFYLLVYLFMNLGAFTCVILFSLRTGTDQIAEYAGLYQKDPLLTLGLSVCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYGLVLLGLITSVI 425
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_COECR (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Coelogyne cristata GN=ndhB PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 76/199 (38.19%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFAIVLALR-QTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +S + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA +++ +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSTEWHLLLEILAILSMILGNLIALTQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSSALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_LEMMI (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Lemna minor GN=ndhB2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 79/199 (39.70%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +SL + W PD+YEGSPTPV AFLS+ K++ SA +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K +LF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIAMNLGTFARIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_LACSA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Lactuca sativa GN=ndhB2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T + I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTENIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVLIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_GUIAB (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Guizotia abyssinica GN=ndhB2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T + I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTENIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVLIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_LEMMI (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Lemna minor GN=ndhB1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 79/199 (39.70%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +SL + W PD+YEGSPTPV AFLS+ K++ SA +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K +LF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIAMNLGTFARIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_LACSA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Lactuca sativa GN=ndhB1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T + I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTENIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVLIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_GUIAB (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Guizotia abyssinica GN=ndhB1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T + I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTENIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVLIGLLTSVV 442 The following BLAST results are available for this feature:
BLAST of CX046848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046848 ID=CX046848; Name=CX046848; organism=Citrus sinensis; type=EST; length=656bpback to top |