CX046848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_TRIEI (NAD(P)H-quinone oxidoreductase subunit 2 OS=Trichodesmium erythraeum (strain IMS101) GN=ndhB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 77/201 (38.31%), Postives = 116/201 (57.71%), Query Frame = 1 Query: 22 LSGSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIA--SMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAF-AIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSV 615 +S IS + + W PD+YEGSPTPV AFLS+ K + A R+ + + Q F F ++A SM+LG + A+AQT +KRLLA+SSIG G++ G T G S++ + +Y M + F ++L +T I++ L + +P+ + S+ + S GIPPLAGF K YLF+A G Y+L +G++TSV Sbjct: 225 ISFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPLVSEQWHFVFTALAILSMVLGNVVALAQTSMKRLLAYSSIGQAGFVMIGLLANTEAGYASMIFYLLVYLFMNLGGFTCVILFSLRTGTDQISEYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYWLVLLGLITSV 425
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_SISMO (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Sisyrinchium montanum GN=ndhB PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 76/199 (38.19%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFAIVLALR-QTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +S + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA +++ +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSMGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_SPIOL (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Spinacia oleracea GN=ndhB2 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 78/193 (40.41%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVL 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_CYCTA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Cycas taitungensis GN=ndhB2 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +SL+ + W PD+YEGSPTPV AFLS+ K++ SA +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SS+G +GYI G G + G S++ + Y M + FA IVL +T I D L +P SA + ++ + S GIPPLAGF K YLF+ G+Y L +G + SVI Sbjct: 226 LSLVPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDLIFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSMGQIGYIIIGIIAGDSKNGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFSAFSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGSYLLVSIGPLMSVI 424
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_SPIOL (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Spinacia oleracea GN=ndhB1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 78/193 (40.41%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVL 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C1_CYCTA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cycas taitungensis GN=ndhB1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +SL+ + W PD+YEGSPTPV AFLS+ K++ SA +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SS+G +GYI G G + G S++ + Y M + FA IVL +T I D L +P SA + ++ + S GIPPLAGF K YLF+ G+Y L +G + SVI Sbjct: 226 LSLVPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDLIFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSMGQIGYIIIGIIAGDSKNGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFSAFSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGSYLLVSIGPLMSVI 424
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NUON2_SOLUE (NADH-quinone oxidoreductase subunit N 2 OS=Solibacter usitatus (strain Ellin6076) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33 Identity = 75/195 (38.46%), Postives = 115/195 (58.97%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFI--YGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRV--KYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVV 606 +S + +MWAPD YEG+PT VTA+LS+A K + A + R+F+ S A + + F +I ++ +G LAA+ QT +KRLLA+SSI H GY+ G G GI+ + + + +Y M + AF +++A+R+ + + + DL L +P A I + S AGIPP AGF K+Y+F A + G LA V + Sbjct: 234 VSAVPFHMWAPDAYEGAPTTVTAYLSVASKAASIAFLLRIFLGPLASARAVWEPLLAFIAIITLTIGNLAAINQTNIKRLLAYSSISHAGYMLLGLVAGNDTGIKGIAVYVMVYTFMNLGAFLVIIAMRRASIIGEDLDDLAGLVHKSPGYAFLMLIFLLSLAGIPPTAGFLGKYYIFLALIQTGHTGLAIVATL 428
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C_PROMP (NAD(P)H-quinone oxidoreductase subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndhB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33 Identity = 75/198 (37.88%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVF--IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 I+ + + W PD+YEGSPTPV AFLS+ K + A R+ + S+ + +F +I SM LG + A+AQT +KR+LA+SSIG G++ G GT +G+ S ++ + Y M + AF+ ++L +T I D L + +P+ + S+ + S G+PP+ GF K YLFFA Y L VG++TSVI Sbjct: 223 IAAVPFHQWTPDVYEGSPTPVVAFLSVGSKTAGFAFAIRILSTTFSSFDEQWKLLFTILAILSMALGNIVALAQTSMKRMLAYSSIGQAGFVMIGIVSGTQDGLSSAVLYLAAYLFMNLGAFSCVILFSLRTGSDRITDYSGLYQKDPLITLGLSLCLLSLGGLPPMLGFFGKIYLFFAGWANHQYLLVVVGLITSVI 420
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_TOBAC (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Nicotiana tabacum GN=ndhB2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33 Identity = 79/199 (39.70%), Postives = 117/199 (58.79%), Query Frame = 1 Query: 34 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQ--IFFFCSIASMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 +SL + W PD+YEGSPTPV AFLS+ K++ A +R+F Y ++ + + +I SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 244 LSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVLIGLLTSVV 442
BLAST of CX046848 vs. ExPASy Swiss-Prot
Match: NU2C2_DAUCA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Daucus carota GN=ndhB2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33 Identity = 78/193 (40.41%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 52 YMWAPDIYEGSPTPVTAFLSIAPKISISANISRVFIYGSYGATLQQIFFFCSIA--SMILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCG-TIEGIQSLLIGIFIYALMTIDAFA-IVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 618 + W PD+YEGSPTPV AFLS+ K++ SA+ +R+F Y ++ + ++A SMILG L A+ QT +KR+LA+SSIG +GY+ G G + +G S++ + Y M + FA IVL +T I D L +P A++ ++ + S G+PPLAGF K YLF+ G YFL +G++TSV+ Sbjct: 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLETLAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVLIGLLTSVV 442 The following BLAST results are available for this feature:
BLAST of CX046848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046848 ID=CX046848; Name=CX046848; organism=Citrus sinensis; type=EST; length=656bpback to top |