DN618446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.333e-37 Identity = 72/105 (68.57%), Postives = 90/105 (85.71%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 ++H D+PQ ERD IM EFRSG++R+LI TD+ ARG+DVQQVSLVINYDLP+N+E YIHRIGR GRFGRKGVAINFV D+ ++R+IEQ+YSTQI+EMP ++ L Sbjct: 291 AIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTERDVGMMREIEQFYSTQIEEMPADIGAL 395
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.424e-37 Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM Q+ERDAIM +FRSG +RVLI+TDVWARG+DVQQ+SLVINYDLP ++E YIHRIGRSGRFGRKG AIN + D L+ +E+YYST+I EMP NV D++ Sbjct: 294 AMHGDMKQEERDAIMNDFRSGNSRVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKGTAINLLTKSDTIELKALEKYYSTKIKEMPSNVNDVM 399
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 72/106 (67.92%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 SMHG+ Q +RD IM FR+G++R+LITTD+ ARG+DVQQVSLVIN+DLP+NRE YIHRIGR GRFGRKGVAINFV ++D +L+++E++YST+I EMP N+ADLI Sbjct: 290 SMHGETEQSQRDVIMKAFRTGSSRILITTDLLARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGVAINFVTSEDHGMLKELERFYSTEIVEMPTNIADLI 395
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 70/105 (66.67%), Postives = 91/105 (86.67%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 ++H D+PQ +RD IM EFRSG++R+LI+TD+ ARG+DVQQVSLVINYDLP N+E YIHRIGR GRFGRKGVAINFV + D+ ++R+IE++YSTQI+EMP ++ L Sbjct: 291 AIHADLPQADRDTIMNEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDQDVGMMREIEKFYSTQIEEMPADIGAL 395
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.266e-36 Identity = 71/105 (67.62%), Postives = 91/105 (86.67%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 ++H D+PQ ERD IM EFRSG++R+LI+TD+ ARG+DVQQVSLVINYDLP N+E YIHRIGR GRFGRKGVAINFV + D+ ++R+IE++YSTQI+EMP ++ L Sbjct: 291 AIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMPADIGAL 395
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.654e-36 Identity = 71/105 (67.62%), Postives = 90/105 (85.71%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 ++H D+PQ ERD IM EFRSG++R+LI+TD+ ARG+DVQQVSLVINYDLP N+E YIHRIGR GRFGRKGVAINFV + D+ ++R+IE++YSTQI EMP ++ L Sbjct: 291 AIHADLPQGERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDKDVGMMREIEKFYSTQITEMPADIGSL 395
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.160e-36 Identity = 69/105 (65.71%), Postives = 92/105 (87.62%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 +++ D+PQ +RD IM EFR+G++R+LI+TD+ ARG+DVQQVSLVINYDLPNN+E YIHRIGR GRFGRKGVAIN V + D+ +R++E++YSTQI+E+P N+ADL Sbjct: 290 AIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRDVGDMRELERFYSTQIEELPANIADL 394
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.160e-36 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 SMHGDM Q+ERD +M +FR+G +RVLI+TDVWARG+DVQQVSLVINYDLP E YIHRIGRSGRFGRKGVAINF+ D+ LR+IE++YS +I+ MP N A+L Sbjct: 294 SMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.160e-36 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 SMHGDM Q+ERD +M +FR+G +RVLI+TDVWARG+DVQQVSLVINYDLP E YIHRIGRSGRFGRKGVAINF+ D+ LR+IE++YS +I+ MP N A+L Sbjct: 294 SMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.685e-36 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQKFYNVVIEELPANVADLL 413 The following BLAST results are available for this feature:
BLAST of DN618446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618446 ID=DN618446; Name=DN618446; organism=Citrus sinensis; type=EST; length=634bpback to top |