DN618446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 SMHGD QKERD IM +FRS +RVLI +DVWARG+DVQ VS VINYD+PNN ELYIHRIGR+GRFGR+GVAINFVK+ D+K L+DIE++Y T+I EMP ADL+ Sbjct: 290 SMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMP---ADLV 392
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 68/105 (64.76%), Postives = 93/105 (88.57%), Query Frame = -1 Query: 320 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADL 634 +++ D+ Q+ERD IM EFRSG++R+LI+TD+ ARG+DVQQVSLVINYDLP+N+E YIHRIGR GRFGRKG+AINFV N DI +R++E++YSTQI+E+P ++++L Sbjct: 290 AIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGIAINFVTNKDIGAMRELERFYSTQIEELPSSISEL 394
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 311 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL 414
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.285e-36 Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGV+INFV +DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERMLSDIQRFYNVVIEELPANVADLL 413
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.285e-36 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVIKDDERMLSDIQRFYNVVIEELPANVADLL 413
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 6.285e-36 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 311 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 414
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.285e-36 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36 Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD +I+ D++++Y+ ++E+P NVADL+ Sbjct: 307 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIVFDVQRFYNVTVEELPANVADLL 410
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36 Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNVIIEELPSNVADLL 413
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.072e-35 Identity = 72/104 (69.23%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 317 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 628 HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVIN+DLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQRFYNVVIEELPANVADLL 413 The following BLAST results are available for this feature:
BLAST of DN618446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618446 ID=DN618446; Name=DN618446; organism=Citrus sinensis; type=EST; length=634bpback to top |