CX046805

Overview
NameCX046805
Unique NameCX046805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS-----------RVGNSSC-EPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            EL Q  +  D + DG +   EL ++L  LGA P    EV+ M+ E+D + DG++ L    +           + G++   E A E EL+E F  +DAD +GKI+A EL  V  +LGD+ C++ DC  MI  VD +GDG V F++F +MM
Sbjct:    5 ELEQVFRRYDANGDGKISAEELASVLRALGA-PLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDK-CSVADCSRMIRSVDADGDGCVNFDEFKKMM 151          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+ +++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     +S +     +   E EL E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F RMM
Sbjct:    1 MADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGHINYEEFVRMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 52/139 (37.41%), Postives = 80/139 (57.55%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLG-DELCTLDDCRGMIALVDKNGDGFVCFEDFSRMME 721
            EL +  ++ DR+ DG + + EL   L  LG   P ++ V+ M+ ++D  GDGY+ +E           E   E +++E F+ FD + DG IT EEL  V   LG  +  TL+DC+ MI+ VD +GDG V F++F +MM+
Sbjct:    5 ELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQ-MIEKIDLNGDGYVDIEEFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMMK 142          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E+KE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKL-TDNEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 53/148 (35.81%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +GDG I     ++ +     +   E E++E F  FD D DG I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_TRYCR (Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD++G G I     ++ +     +   E E+KE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E+KE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKL-TDNEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMMELQR 730
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M   R
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVMMANR 150          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CML11_ARATH (Calmodulin-like protein 11 OS=Arabidopsis thaliana GN=CML11 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 52/145 (35.86%), Postives = 83/145 (57.24%), Query Frame = 2
Query:  284 DISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            +++ +   E  +A  L D+D DG +   EL A +IR     PT++E++ M++E+D +G+G I     ++ + N   E   + ELKE F  FD D +G I+A EL  V   LG++L T ++   MI   D +GDG V +++F RMM
Sbjct:   27 ELTQEQIMEFKEAFCLFDKDGDGCITADEL-ATVIRSLDQNPTEQELQDMITEIDSDGNGTIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVDQMIKEADLDGDGQVNYDEFVRMM 169          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D DG I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146          
The following BLAST results are available for this feature:
BLAST of CX046805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
CML18_ORYSJ2.114e-1738.26Probable calcium-binding protein CML18 OS=Oryza sa... [more]
CALM_STYLE2.114e-1735.81Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CML3_ARATH2.761e-1737.41Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CALM_PLEOS2.761e-1735.14Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_PATSP2.761e-1735.81Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_TRYCR3.607e-1735.14Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2[more]
CALM_PLECO3.607e-1735.14Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM3_PETHY3.607e-1734.87Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CML11_ARATH4.710e-1735.86Calmodulin-like protein 11 OS=Arabidopsis thaliana... [more]
CALM_WHEAT4.710e-1737.23Calmodulin OS=Triticum aestivum PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_10C10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C10-F19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046805 ID=CX046805; Name=CX046805; organism=Citrus sinensis; type=EST; length=829bp
CTTCTCTTTCCTCTTTTCCCCTTCACGAGAAACTCGAATTCGTCTTTTCT
TTCTTCGCGTTTCGGAAATGAAACTCATCGAGAAGCTCAGCCCGAAACGT
CTCTTCCGGTCCAAGTCCAAGAAGGACCGGACCAGCGTTTCGCGTTCTGA
CCCATCATCGTTCAGCTCGTCCTCTACCTCCGACTCGTCCACCCACAACA
AACTCGGTTCGGCGCCGGACAGAGTCGGGACGCCAACGAGTGTCTTACAC
GAGATATCGGGTGACTGGTCCGACATGTCGGCCGATATCTCGCTAGATAT
GAACTACGAGCTCGTCCAGGCGTGTAAGTTGCTCGACAGGGACAACGACG
GGGTGGTGTTGAGAAGCGAGCTGGAGGCGCTCTTGATCCGGCTCGGAGCG
GACCCGCCGACCCAAGAGGAGGTCAAGTCGATGCTGAGCGAGGTGGATCG
GGAGGGCGACGGGTATATACCCTTGGAGGCGCTGATTAGCCGGGTCGGGA
ACTCGTCCTGCGAGCCGGCTTGTGAACCGGAGCTCAAGGAGACGTTTGAC
TTCTTTGACGCGGATCACGATGGTAAGATCACGGCCGAGGAGTTGTTCGG
TGTTTTCACCAAATTAGGGGACGAGCTGTGCACGTTAGACGACTGCCGGG
GCATGATAGCGCTGGTGGATAAAAACGGGGATGGGTTCGTCTGCTTCGAG
GACTTTTCAAGGATGATGGAGTTGCAGAGATGATCGTGATTATATTGTTA
TCTATACATAAATCAATATGTTTTTAAAACACCCCGTGATGATAATGATG
ATCATGTGNATATGTTTCCTCCTCTTGAT
back to top