CX046805

Overview
NameCX046805
Unique NameCX046805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD++G G I     ++ +     +   E E+KE F  FD D +G I+A EL  + T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD++G G I     ++ +     +   E E+KE F  FD D +G I+A EL  + T LG++L T ++   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 53/148 (35.81%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     +S +     +   E EL E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F RMM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGHINYEEFVRMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_SOLLC (Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M+SEVD + +G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F RMM
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVRMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L D+D DG +   EL  ++  LG +P +Q E++ M++EVD +G+G I     ++ +     +   E E+KE F  FD D +G I+A EL  V T LG++L T  +   MI   D +GDG + +E+F +MM
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-SQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKL-TDSEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  +S +   E  +A  L DRD DG +   EL  ++  LG +P T+ E++ M+ EVD +G G I     +S +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D N DG V +E+F RMM
Sbjct:    1 MAERLSEEQIAEFKEAFSLFDRDGDGCITTMELGTVMRSLGQNP-TEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIKEADCNNDGQVNYEEFVRMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_SCHPO (Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L DRD DG +  +EL  ++  LG  P T  E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G IT EEL  V T LG+ L + ++   MI   D +GDG + +E+FSR++
Sbjct:   13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSP-TAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERL-SQEEVADMIREADTDGDGVINYEEFSRVI 147          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17
Identity = 51/137 (37.23%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I    L++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPELLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ D   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG + +E+F ++M
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVKVM 146          
The following BLAST results are available for this feature:
BLAST of CX046805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
CALM_TRYBG4.710e-1734.46Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB4.710e-1734.46Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_TETPY4.710e-1735.81Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_SOLLC4.710e-1736.49Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 S... [more]
CALM_HELAN4.710e-1735.14Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_AGABI4.710e-1735.14Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALMS_CHICK4.710e-1737.16Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALM_SCHPO6.152e-1736.50Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE... [more]
CALM_MAIZE6.152e-1737.23Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2[more]
CALM_LILLO6.152e-1735.14Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10C10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C10-F19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046805 ID=CX046805; Name=CX046805; organism=Citrus sinensis; type=EST; length=829bp
CTTCTCTTTCCTCTTTTCCCCTTCACGAGAAACTCGAATTCGTCTTTTCT
TTCTTCGCGTTTCGGAAATGAAACTCATCGAGAAGCTCAGCCCGAAACGT
CTCTTCCGGTCCAAGTCCAAGAAGGACCGGACCAGCGTTTCGCGTTCTGA
CCCATCATCGTTCAGCTCGTCCTCTACCTCCGACTCGTCCACCCACAACA
AACTCGGTTCGGCGCCGGACAGAGTCGGGACGCCAACGAGTGTCTTACAC
GAGATATCGGGTGACTGGTCCGACATGTCGGCCGATATCTCGCTAGATAT
GAACTACGAGCTCGTCCAGGCGTGTAAGTTGCTCGACAGGGACAACGACG
GGGTGGTGTTGAGAAGCGAGCTGGAGGCGCTCTTGATCCGGCTCGGAGCG
GACCCGCCGACCCAAGAGGAGGTCAAGTCGATGCTGAGCGAGGTGGATCG
GGAGGGCGACGGGTATATACCCTTGGAGGCGCTGATTAGCCGGGTCGGGA
ACTCGTCCTGCGAGCCGGCTTGTGAACCGGAGCTCAAGGAGACGTTTGAC
TTCTTTGACGCGGATCACGATGGTAAGATCACGGCCGAGGAGTTGTTCGG
TGTTTTCACCAAATTAGGGGACGAGCTGTGCACGTTAGACGACTGCCGGG
GCATGATAGCGCTGGTGGATAAAAACGGGGATGGGTTCGTCTGCTTCGAG
GACTTTTCAAGGATGATGGAGTTGCAGAGATGATCGTGATTATATTGTTA
TCTATACATAAATCAATATGTTTTTAAAACACCCCGTGATGATAATGATG
ATCATGTGNATATGTTTCCTCCTCTTGAT
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