CX046805

Overview
NameCX046805
Unique NameCX046805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E ELKE F  FD D +G I+A +   V T LG++L T ++   MI   D +GDG V +E+F +MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKL-TDEEVDEMIREADVDGDGQVNYEEFVKMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 49/137 (35.77%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +++F +MM
Sbjct:   14 EFKEAFSLFDKDGDGSITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKL-TNEEVDEMIREADLDGDGQVNYDEFVKMM 148          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALL3_MOUSE (Calmodulin-like protein 3 OS=Mus musculus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 47/148 (31.76%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++E+D++G+G +     ++ +     +   E E++E F  FD D +G ++A EL  V TKLG++L   ++   MI   D +GDG V +E+F  M+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTQELGTVMRSLGQNP-TEAELQGMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTKLGEKLSD-EEVDEMIQAADTDGDGQVNYEEFVHML 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  308 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMMELQR 730
            E  +A  L D+D DG +   EL  ++  LG  P T+ E+K M+ EVD +G G I  E  +  +     +   E +++E F  FD D +G IT +EL  V   LGD L   D+   M+   D +GDG + + +F ++M  +R
Sbjct:   11 EFREAFNLFDKDGDGTITSKELGTVMGSLGQSP-TEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSD-DELADMLHEADSDGDGQINYNEFLKVMMAKR 149          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_DROME (Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX046805 vs. ExPASy Swiss-Prot
Match: CALM_APLCA (Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  275 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 718
            M+  ++ +   E  +A  L D+D DG +   EL  ++  LG +P T+ E++ M++EVD +G+G I     ++ +     +   E E++E F  FD D +G I+A EL  V T LG++L T ++   MI   D +GDG V +E+F  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
The following BLAST results are available for this feature:
BLAST of CX046805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
CALM_STIJA3.053e-1634.46Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MOUSC3.053e-1634.46Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_DICDI3.053e-1635.77Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALL3_MOUSE3.053e-1631.76Calmodulin-like protein 3 OS=Mus musculus GN=Calml... [more]
CML2_ORYSJ3.988e-1634.04Putative calmodulin-like protein 2 OS=Oryza sativa... [more]
CALM_LUMRU3.988e-1634.46Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_LOCMI3.988e-1634.46Calmodulin OS=Locusta migratoria PE=1 SV=2[more]
CALM_DROME3.988e-1634.46Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 ... [more]
CALM_CAEEL3.988e-1634.46Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_APLCA3.988e-1634.46Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10C10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10C10-F19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046805 ID=CX046805; Name=CX046805; organism=Citrus sinensis; type=EST; length=829bp
CTTCTCTTTCCTCTTTTCCCCTTCACGAGAAACTCGAATTCGTCTTTTCT
TTCTTCGCGTTTCGGAAATGAAACTCATCGAGAAGCTCAGCCCGAAACGT
CTCTTCCGGTCCAAGTCCAAGAAGGACCGGACCAGCGTTTCGCGTTCTGA
CCCATCATCGTTCAGCTCGTCCTCTACCTCCGACTCGTCCACCCACAACA
AACTCGGTTCGGCGCCGGACAGAGTCGGGACGCCAACGAGTGTCTTACAC
GAGATATCGGGTGACTGGTCCGACATGTCGGCCGATATCTCGCTAGATAT
GAACTACGAGCTCGTCCAGGCGTGTAAGTTGCTCGACAGGGACAACGACG
GGGTGGTGTTGAGAAGCGAGCTGGAGGCGCTCTTGATCCGGCTCGGAGCG
GACCCGCCGACCCAAGAGGAGGTCAAGTCGATGCTGAGCGAGGTGGATCG
GGAGGGCGACGGGTATATACCCTTGGAGGCGCTGATTAGCCGGGTCGGGA
ACTCGTCCTGCGAGCCGGCTTGTGAACCGGAGCTCAAGGAGACGTTTGAC
TTCTTTGACGCGGATCACGATGGTAAGATCACGGCCGAGGAGTTGTTCGG
TGTTTTCACCAAATTAGGGGACGAGCTGTGCACGTTAGACGACTGCCGGG
GCATGATAGCGCTGGTGGATAAAAACGGGGATGGGTTCGTCTGCTTCGAG
GACTTTTCAAGGATGATGGAGTTGCAGAGATGATCGTGATTATATTGTTA
TCTATACATAAATCAATATGTTTTTAAAACACCCCGTGATGATAATGATG
ATCATGTGNATATGTTTCCTCCTCTTGAT
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