CX046767

Overview
NameCX046767
Unique NameCX046767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:277..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.984e-43
Identity = 93/196 (47.45%), Postives = 132/196 (67.35%), Query Frame = -1
Query:  293 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEE----AGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKL 868
            +++W+KW+IFW DERV A +HADSNYKLA +G LSKVP+   ++++I++ L AE     A + YE  ++Q V   ++     S  P+FDL LLGMG DGH+ASLFP H+ ++ K +WV+ ITDSPKPP +RIT TLPVIN AS     V  + +A++V  A++    +   LPA  +   + ++VWFLD+ AASKL
Sbjct:   61 SIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALN----HTKDLPAGRL-TADVEVVWFLDQAAASKL 251          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.527e-42
Identity = 91/196 (46.43%), Postives = 130/196 (66.33%), Query Frame = -1
Query:  293 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSA----EEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKL 868
            +++W KW++FW DERV A    DSNYKLA EG LSKVPI   ++++I+  L+A    E     YE  ++ LVK +++ +S  +  P+FDL LLGMG DGH+ASLFPNH  ++ K +WV++ITDSPKPPP+RITFTLPVINS       +  ++ A++V    + +  N  SLP+  +     + VW+LD+ AAS+L
Sbjct:   61 SIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSV---AEIMKHNNLSLPSAHLS-AQVENVWYLDQAAASEL 252          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.610e-39
Identity = 91/196 (46.43%), Postives = 127/196 (64.80%), Query Frame = -1
Query:  293 TVDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSA----EEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKL 868
            +++W+KW+IFW DERVV  +H DSNYKLA +G LSKVPI  ++++ I+   +A    + A   YE  +++LV   ++     S  P+FDL LLGMG DGH+ASLFP H  +  K   V++ITDSPKPPP+RITFTLPVIN AS     V  E++A+AV    +    +   LPA  +   + + +WFLD+ AASK+
Sbjct:   67 SIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFN----HNFDLPAAWL-TADVEAIWFLDQAAASKI 257          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.835e-38
Identity = 86/193 (44.56%), Postives = 122/193 (63.21%), Query Frame = -1
Query:  278 AKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESVQF 856
            A+W + + DER+V   HA+S Y L +  LLSK+PI  S V +IN +L  EEA ++Y   +RQ  +   +        P FDL++LG+G DGH  SLFP+H +L  + + V+ I+DSPKPPP+R+T TLPV+N+A       TGE KA  +   ++D   N   LPA +VQP+ GKL WFLD+ AA++L +V F
Sbjct:   71 ARWTLGFCDERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILKRILEDKEEN--PLPAALVQPSAGKLCWFLDE-AAARLLTVPF 252          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.571e-37
Identity = 85/193 (44.04%), Postives = 121/193 (62.69%), Query Frame = -1
Query:  278 AKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESVQF 856
            A+W + + DER+V  +HA+S Y L +  LLS++PI  S V +IN  L  EEA ++Y   +RQ  +   +        P FDL++LG+G DGH  SLFP+H +L  + + V+ I+DSPKPPP+R+T TLPV+N+A       TGE KA  +   ++D   N   LPA +VQP  GKL WFLD+ AA++L +V F
Sbjct:   71 ARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEEN--PLPAALVQPHTGKLCWFLDE-AAARLLTVPF 252          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37
Identity = 85/194 (43.81%), Postives = 123/194 (63.40%), Query Frame = -1
Query:  278 WAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESVQF 859
            +A+W + + DER+V  +HA+S Y L +  LLSK+PI  S V +IN +L  E+A ++Y   +RQ ++   V        P FDL++LG+G DGH  SLFP+H +L  + + V+ I+DSPKPPP+R+T TLPV+N+A       TGE KA  +   ++D      +LPA +VQP  G L WFLD+ AA++L SV F
Sbjct:   70 FARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILED---KEGTLPAALVQPRTGALCWFLDE-AAARLLSVPF 251          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.712e-36
Identity = 85/194 (43.81%), Postives = 120/194 (61.86%), Query Frame = -1
Query:  278 WAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLESVQF 859
            +A+W + + DER+V  +HA+S Y L +  LLSK+PI  S V +I+ +L  E+A ++Y   +RQ  +   V        P FDL++LG+G DGH  SLFP H +L  + + V+ I DSPKPPP+R+T TLPV+N+A       TGE KA  +   ++D      +LPA MVQP  G L WFLD+ AA++L SV F
Sbjct:   70 FARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLKRILED---QESALPAAMVQPRTGALCWFLDE-AAARLLSVPF 251          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.855e-30
Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = -1
Query:  290 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVP-IVPSHVHSINDSLSAEE------AGDEYEFDIRQLVKARMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLE 865
            ++++KW +F+ADER+V  +  +SNY L K+ +  K     P  +H+IN  L  E         DEYE   +QLV   +   S     P FDL+LLG G DGH  SLFP+H VL     WV+ +TDSPKPP +RIT TLPV+  A       TG  K + + + I+D     PS  A + +    +  WF+D  A++ LE
Sbjct:   57 IEFSKWEVFFADERIVPLDDENSNYALCKKLIFDKFEGFDPKKIHTINPELLKENPIDPQNVADEYE---KQLV--HVFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVIEDFTSKLPS--ALITRNNLTRTSWFVDDEASANLE 248          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24
Identity = 71/195 (36.41%), Postives = 102/195 (52.31%), Query Frame = -1
Query:  287 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDI--SDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLES 865
            ++W+K ++FW DER V ++  + N K A+  LL+ V I  + VH     ++A +     + D   L   +++  S       P FD+ LLGMG +GH+ SLFP+   +    + V  + DSPKPPP RIT TLP I  +      V+G  KA+AV  AI    P   S+PA         L W LD+ AA+KL S
Sbjct:   60 IEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHP----MAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADP--VSVPAAGAVGRQNTL-WLLDRDAAAKLPS 247          
BLAST of CX046767 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24
Identity = 71/195 (36.41%), Postives = 102/195 (52.31%), Query Frame = -1
Query:  287 VDWAKWYIFWADERVVAKNHADSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAGDEYEFDIRQLVKARMVCVSDI--SDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMVQPTNGKLVWFLDKPAASKLES 865
            ++W+K ++FW DER V ++  + N K A+  LL+ V I  + VH     ++A +     + D   L   +++  S       P FD+ LLGMG +GH+ SLFP+   +    + V  + DSPKPPP RIT TLP I  +      V+G  KA+AV  AI    P   S+PA         L W LD+ AA+KL S
Sbjct:   60 IEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHP----MAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADP--VSVPAAGAVGRQNTL-WLLDRDAAAKLPS 247          
The following BLAST results are available for this feature:
BLAST of CX046767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
6PGL2_ARATH6.984e-4347.45Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH4.527e-4246.43Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH1.610e-3946.43Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL_BOVIN8.835e-3844.566-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN2.571e-3744.046-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_MOUSE5.727e-3743.816-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_RAT3.712e-3643.816-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_SCHPO8.855e-3038.69Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]
6PGL_MYCTU4.257e-2436.416-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO4.257e-2436.416-phosphogluconolactonase OS=Mycobacterium bovis G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_10A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A12-B23-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046767 ID=CX046767; Name=CX046767; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTGGGCGAAAAAAGAAAAAGGCTTTCTCATTGAGGCTCCAACATT
ATTTACCTCATCTTACAAAAAGATCACCACACTTCTCAACCCCACTAGAA
AAGAGAGGATTAAAAAGAGAATATAGGGGGAAAAAAGGCCAAAATGGAGA
ATTCAACCCAAAGCAACATAAAAGAAGCGGCGCCTAACGGAAGAAGCTAA
AAGGATCAATAGTTCTCAAACCCCTCCACTACATACAAACATACACTTGG
GCAAGAATTGCTTTGACCCTACTCACAAAATTGAACACTTTCGAGCTTTG
AGGCAGCCGGCTTGTCCAAAAACCATACCAACTTCCCATTTGTTGGCTGG
ACCATTCGTGCTGGCAGTGATGGGCAATTAGGTCCAAGGTCATCAATCGC
CAAGTGCACAGCCTCTGCCTTGCTCTCACCTGTCACGACCACAACTACAA
TGGATGCTGAGTTGATGACAGGCAAAGTGAATGTGATCCTCTCTGGTGGG
GGTTTAGGCGAATCAGTGATAAAGCTTACCCACTGATTTTTCACATCAAG
CACCGAATGGTTAGGGAACAGTGAGGCAACATGGCCATCAGAGCCCATTC
CAAGAAGAATGAGGTCAAATTTGGGGCAGTCACTAATATCAGAGACACAG
ACCATCCGGGCTTTCACCAGCTGTCGGATGTCAAACTCATACTCATCACC
AGCCTCCTCTGCTGACAATGAATCATTAATGGAATGTACGTGACTGGGAA
CTATCGGAACCTTGGACAAAAGGCCTTCCTTTGCAAGCTTATAATTGCTA
TCAGCATGATTTTTTGCCACTACGCGTTCGTCTGCCCAGAATATATACCA
TTTAGCCCAGTCAACAGT
back to top