CX046762

Overview
NameCX046762
Unique NameCX046762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO2_ARATH (Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40420 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3
Query:  321 GSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 578
            GSLL L+GL +AG+VI L +A PL ++ SPV+VPA +T+ L + GFLASG FG+  +S +SW+  Y+ G      +QLE A+ ++A
Sbjct:   65 GSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMA 150          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO5_ARATH (Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GG+LL ++GLT+AG+VI L +A PL +I SPV+VPA   + L + GFLASG  G+  +S +SW+  Y+   G H P  ++LE+A+ +LA  A  +  R +
Sbjct:   47 GGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQRTK 144          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO2_SOYBN (P24 oleosin isoform B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = -3
Query:  312 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKA 581
            GG LL+L+GLT+AGT+  L +ATPL +I SPVL+PA + + L + GFL SG FG+ A+S  SWI  Y+    P   +    A+  LA  A
Sbjct:   65 GGILLLLAGLTLAGTLTGLVVATPLFIIFSPVLIPATVAIGLAVAGFLTSGVFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAA 154          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO4_ARATH (Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 39/87 (44.83%), Postives = 61/87 (70.11%), Query Frame = -3
Query:  321 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 581
            GG+LL L+GLT+AG+VI L ++ PL ++ SPV+VPA +T+ L + G LASG FG+  +S +SW+  Y+ G      +QL+ A+ ++A
Sbjct:   62 GGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMA 148          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLES2_BRANA (Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = -3
Query:  321 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 581
            GGSLL L+GLT+AG+VI L ++ PL ++ SPV+VPA IT+ L +   LASG FG+  +S +SW+  Y+ G      +QL+ A+ ++A
Sbjct:   59 GGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMA 145          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO7_GOSHI (Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = -3
Query:  318 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWI---YRYVTGGHPPGADQLEQARMKLAG 581
            GG+LL L+GLT+ GTVI L +ATPL VI SPVLVPA I V + + GFL+SG FG+  +S LS++   +R  TG     AD+ ++    + G
Sbjct:   41 GGTLLALAGLTLTGTVIGLCMATPLFVIFSPVLVPAAIAVFMAVAGFLSSGAFGLTGLSSLSYVFNRFRQATGTEQLDADRAKRGMQDMVG 131          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO6_GOSHI (Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = -3
Query:  372 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWI---YRYVTG 581
            GG+LL L+GLT+AGTVI L +ATPL +I SPVLVPA I +++ + GFL+SG FG+  +S LS++    RY TG
Sbjct:   53 GGTLLALAGLTLAGTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRLRYATG 125          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLES1_BRANA (Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 39/98 (39.80%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  288 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 581
            GG+LL L+GLT+A +VI L +A PL +I SPV+VPA   + L + GF+ASG  G+  +S +SW+  ++        D+L++A+ +LA  A     R +
Sbjct:   47 GGTLLTLAGLTLAVSVIGLILAFPLFLIFSPVIVPAAFVIGLAMTGFMASGAIGLTGLSSMSWVLNHIRRVRERIPDELDEAKQRLADMAEYAGQRTK 144          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO_HELAN (Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = -3
Query:  315 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQARMKLAGK 581
            GG LL L+ LT  GT+I L +ATPL VI SP++VPAV+T+ L + GFLASG FG+  +S LS+++  V  T G  P +    +  ++ AG+
Sbjct:   46 GGILLGLAALTFIGTLIGLALATPLFVIFSPIIVPAVLTIGLAVTGFLASGTFGLTGLSSLSYLFNMVRQTAGSVPESLDYVKGTLQDAGE 136          
BLAST of CX046762 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSJ (Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=OLE18 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.106e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = -3
Query:  312 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKA 581
            GG LLVLSGL +A +V+ L +ATP+ +I SPVLVPA + + L + GFL SG  G+  +S L+++            D +EQAR ++A  A
Sbjct:   46 GGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAA 135          
The following BLAST results are available for this feature:
BLAST of CX046762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO2_ARATH1.069e-1647.67Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40... [more]
OLEO5_ARATH1.396e-1644.00Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=... [more]
OLEO2_SOYBN1.823e-1646.67P24 oleosin isoform B OS=Glycine max PE=2 SV=1[more]
OLEO4_ARATH2.380e-1644.83Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE... [more]
OLES2_BRANA3.109e-1645.98Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1[more]
OLEO7_GOSHI6.926e-1648.35Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE... [more]
OLEO6_GOSHI9.046e-1656.16Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A ... [more]
OLES1_BRANA1.306e-1439.80Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1[more]
OLEO_HELAN2.910e-1446.15Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1[more]
OLEO2_ORYSJ1.106e-1343.33Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A09-B17-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046762 ID=CX046762; Name=CX046762; organism=Citrus sinensis; type=EST; length=721bp
TTTTTTTTTACATTTCAAAGACCAATAACAAAAACCCTGCAGGAGCGCCC
CACCACATTAACAAAACTTATTACAGAGATTACCACGAATACAAAAAGGA
AAAAACACATTGGCACAAATTAACAAGAAAATTAACACAAAAGACAACCA
ATGACCCCTCAACTAGTATCATAGCCGTTTGATCTTCACCCATATCTTTA
TCAACCAACAACAACCCTTCATCACATGCATAACAACGCAGTTTAAGAAC
CCTGCTGCGAGCCAGTGATTTGCTGCTGCCCAAACTGCTCAGCCCTGTCC
CTCATCTCCCTAGCCTTACCGGCCAGCTTCATCCGCGCCTGCTCCAGCTG
ATCCGCCCCTGGTGGGTGCCCCCCAGTGACATACCTATAAATCCATGATA
AGACGCTGATGGCTGCTACACCGAATCCGCCAGAGGCCAAGAACCCCATG
ATGAGAAGAGAAACGGTGATAACCGCAGGGACAAGAACAGGACTACAAAT
GACTAGCAGTGGAGTAGCAATGGTCAGTGCAATGACAGTCCCAGCCATGG
TTAAGCCAGAGAGGACCAACAGAGACCCACCGGCTGTGACGGCGGTTGCC
GCCTTCACGACCTGGTGGGACCGGGGCTGACGGCTCTGCAGCTGTGTCTG
CTGGAGTGGTTGGTAATGTTCAGCCATATCGGTATTGATGTTAAATCTAA
CGGTGATTATTTGTCGATCCT
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