CX046751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.273e-48 Identity = 84/166 (50.60%), Postives = 110/166 (66.27%), Query Frame = 2 Query: 119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 R KIPDP+AVKPDDWDEDAP +I DE+A KPEGWL A KP AP+I NP+CE+APGCG W+RP+ NP YKGKW P+IDNP+Y+GIWKP++IPNP++FE L+ P +A+G+E+W+M I FDN +I D ++ + + W Sbjct: 290 RPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRRIVDDWANDGW 455
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.601e-44 Identity = 87/198 (43.94%), Postives = 111/198 (56.06%), Query Frame = 2 Query: 41 DDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV 631 DD PP+ RAKIPDP AVKP+DWDE+ P +IED AVKP+GWL A KP AP I NP C+ GCGEWK PM NP YKG W P+I+NPNY+G+W PQ+IPNP+YFE D P +A+G+E+W+M I FDN +I +++VA+ + W+ K V Sbjct: 255 DDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPEDWDENEPAQIEDSSAVKPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQI--GCGEWKPPMIDNPKYKGIWRPPMINNPNYQGLWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEKEVADQWATDGWELKIMV 450
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.291e-43 Identity = 83/169 (49.11%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPK 622 RAKIPDP AVKP+DWDE P +IED VKP GWL A KP AP+I NP C GCGEWK PM NP YKG W PL+DNPNY+GIW P++IPNP+YFE D P +A+G+E+W+M I FDN +I +++VA+ + A W+ K Sbjct: 281 RAKIPDPSAVKPEDWDESEPAQIEDSSVVKPAGWLDDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRI--GCGEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEKEVADHWAADGWRWK 447
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.995e-41 Identity = 80/169 (47.34%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPK 622 RAKIPD AVKP+DWDE P +I D AVKP+GWL A KP AP I NP C GCGEW PM NP YKG W P+IDNPNY+GIW P++IPNP+YFE + P A+G+E+W+M I FDN +I +++VA+ + A W K Sbjct: 277 RAKIPDASAVKPEDWDESEPPQIVDSSAVKPDGWLDNEPEFIPDPNAEKPFDWNEDMDGEWEAPHISNPACRI--GCGEWSPPMIDNPKYKGIWRPPMIDNPNYQGIWSPRKIPNPDYFEDNHPFLLTSFRALGLELWSMTSDIYFDNFIICSEKEVADRWAADGWGMK 443
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.278e-40 Identity = 84/194 (43.30%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 44 DFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPK 622 DF PP++ +IPDP+AVKPDDWDEDAP I D DAVKPE WL A KP +I NPKC GCGEWK PM RNP Y+G W P+I NP + G W P++IPNP+YF+ D P F P+ VG E+WTMQ I F NI + + AE + PK Sbjct: 231 DFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIPDPDAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKPPMIRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNIRFSNIYVGHSIEDAERLGNETFLPK 424
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.404e-36 Identity = 77/157 (49.04%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKP--DFEPIAAVGIEIWTMQDGILFDNILISKDEK 583 R I D AVKPDDWDE+ P + DE A KP W A KP AP IDNP C+ GCG WK P +NP YKGKW P I NP +KG W + I NPNYFE KP PI AVGIE+WTM + ILFDNILI+ E+ Sbjct: 282 RENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLIDNPNYFE-PKPFAGLAPITAVGIEMWTMSENILFDNILITSSEE 437
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 60/168 (35.71%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 KI DPDA KP+DWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FDN LI+ DE AE + W Sbjct: 207 KIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETW 347
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 60/168 (35.71%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 KI DPDA KP+DWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FDN LI+ DE AE + W Sbjct: 207 KIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETW 347
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 60/168 (35.71%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 KI DPDA KP+DWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FDN LI+ DE AE + W Sbjct: 207 KIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETW 347
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22 Identity = 60/163 (36.81%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 128 IPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDK-PDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 I DP A KP+DWDE EI D + KPEGW A KP G W+ PM NP YKG+W A +I NP YKGIW I NP+Y DK +F+ + VG E+W ++ G +FDNIL++ D + A+ + W Sbjct: 211 IKDPKASKPEDWDERE--EIADPEDKKPEGW-DDIPATIADKDAKKPEDWDDEED-------------------GTWEPPMIPNPEYKGEWKAKMIKNPAYKGIWVAPDIDNPDYVHDDKLYNFKDLKFVGFELWQVKSGSIFDNILVTDDLEAAKKFAEDTW 351 The following BLAST results are available for this feature:
BLAST of CX046751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046751 ID=CX046751; Name=CX046751; organism=Citrus sinensis; type=EST; length=820bpback to top |