CX046751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.201e-18 Identity = 57/166 (34.34%), Postives = 77/166 (46.39%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 +I DP+A KP+DW++ I D + KPEG+ A KP AP I NP + GEWK +NP +KGKW AP+IDNP++K D PD F + VGIE+W ++ G +FDN+LI D A+ W Sbjct: 210 QIKDPEAKKPEDWEDKE--YIPDPEDKKPEGY-DDIPKEITDPEAKKPEDWDDEEDGEWTAPTIPNPDYK-----GEWKPKKIKNPNFKGKWKAPMIDNPDFK----------------DDPDIYVFPKLKYVGIELWQVKSGTMFDNVLICDDPDYAKKLAEETW 351
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18 Identity = 59/182 (32.42%), Postives = 75/182 (41.21%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDE----------------DAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613 KI DP A KP+DWDE D P EI D D+ KPE W D+ + GEW P NP Y G+W I NPNYKG W+ I NP++ D P+ F + VG+E+W ++ G LFDN+LI D A+ W Sbjct: 210 KIKDPSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEIPDTDSKKPEDW--------------------------------DDEED------GEWTAPTIPNPEYMGEWKPKQIKNPNYKGKWEAPLIDNPDF--KDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPDYAKKLADETW 351
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.589e-17 Identity = 59/161 (36.65%), Postives = 74/161 (45.96%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPDF-----EPIAAVGIEIWTMQDGILFDNILISKDEKVAE 592 KI DP+A KP+DWD D P I D + KPE W ATKP GEW+ PM NP YKG W IDNP YKG W +I NP Y PD + I AVG+++W ++ G +FD+ LI+ D A+ Sbjct: 207 KIKDPEAKKPEDWD-DKP-TIPDPEDKKPEDW--DKPEHIPDPDATKPEDWDDEMD-------------------GEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEY----TPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAK 340
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15 Identity = 50/159 (31.45%), Postives = 73/159 (45.91%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDNILISKDEKVAESY 598 +I DP+ VKP D D P I D +AVKPE W N + + GEW+ P NP YKG+W A I NP YKG W I NP Y E ++ F + A+G E+W ++ G +F+N++++ + A+ + Sbjct: 224 EIDDPEDVKPAGHD-DIPASIVDPEAVKPEDW---------------------------------NEEDD-----GEWEAPTIANPEYKGEWKAKKIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDF 343
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13 Identity = 54/160 (33.75%), Postives = 70/160 (43.75%), Query Frame = 2 Query: 125 KIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFDNILISKDEKVAES 595 KI +A KP+DWD+ I+D + VKPEG+ A +P PKI N + G WK +NP YKGKW P IDNP ++ D PD + I GIE+W ++ G +FDNILI D A S Sbjct: 216 KIKVKNAKKPEDWDDRE--YIDDPNDVKPEGF-DSIPREIPDRKAKEPEDWDEEENGLWEPPKIPNSAYK-----GPWKAKRIKNPNYKGKWKNPWIDNPEFE----------------DDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPAYARS 351 The following BLAST results are available for this feature:
BLAST of CX046751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046751 ID=CX046751; Name=CX046751; organism=Citrus sinensis; type=EST; length=820bpback to top |