CX046736

Overview
NameCX046736
Unique NameCX046736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3410 contig Csv1_Contig3410:139..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA2_HUMAN (Nascent polypeptide-associated complex subunit alpha-2 OS=Homo sapiens GN=NACA2 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 80/136 (58.82%), Postives = 103/136 (75.74%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            AM KLG+  + GV+RVT+ KSKNILFVI+K DV+KSP SD YIVFGEAKI+DLS Q Q  AAE+F+V     GN+    ++  + +  ++EEVDETGVE KD++LVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLLQVTGVTRVTIWKSKNILFVITKLDVYKSPASDAYIVFGEAKIQDLSQQAQLAAAEKFRVQGEAVGNIQENTQTPTVQEESEEEEVDETGVEVKDVKLVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_ASPCL (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus clavatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33
Identity = 78/149 (52.35%), Postives = 103/149 (69.13%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA-----------SKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SPTS+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A             PE+ A  +    D EEVDETG+E KDIELVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPTSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_NEOFI (Nascent polypeptide-associated complex subunit alpha OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.666e-33
Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA-----------SKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A             PE+ A  +    D EEVDETG+E KDIELVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_ASPFU (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus fumigatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.666e-33
Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA-----------SKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A             PE+ A  +    D EEVDETG+E KDIELVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_CAEBR (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis briggsae GN=CBG05114 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.649e-32
Identity = 75/131 (57.25%), Postives = 93/131 (70.99%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KLG+K + GVSRV ++KSKNILFVI+KPDVFKSP SDTYI+FGEAKIEDL+   Q  A E  K P      + +  E      +D E D TG+E KDIELV++QA   R++A++ALK AD DIV+AIM LT
Sbjct:   70 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENMK-PTREAPQLKTVEEDD---NEDVEEDSTGIEEKDIELVISQANTTRNKAIRALKDADNDIVNAIMSLT 196          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_EMENI (Nascent polypeptide-associated complex subunit alpha OS=Emericella nidulans GN=egd2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.153e-32
Identity = 75/148 (50.68%), Postives = 103/148 (69.59%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPP----------PNTGNVASKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q                +       PE+ A  +    D EEVDETG+EPKDI+LVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGEHAGHDHDHDKGKGKAPETEAKKEEEEDDGEEVDETGLEPKDIDLVMAQANVSRKKAVKALRENDNDIVNSIMALS 202          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_COCIM (Nascent polypeptide-associated complex subunit alpha OS=Coccidioides immitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.797e-32
Identity = 76/149 (51.01%), Postives = 104/149 (69.80%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGN------------VASKPESSAMVQDDE---EVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        GN                PE+    +++E   EVDETG+E KDIELVM QA V RS+A+KALK  D DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLSAAEA-AGNGEHAGHEHIDLGKGKAPETEKKEEEEEEEGEVDETGLEAKDIELVMAQANVSRSKAIKALKENDNDIVNSIMALS 204          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_BOTFB (Nascent polypeptide-associated complex subunit alpha OS=Botryotinia fuckeliana (strain B05.10) GN=egd2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.266e-32
Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPN-----------------TGNVASKPESSAMVQDD-EEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            ++ KLG+  +PG++RVT+++ KNILFVI++P+V+KSPTS+TYIVFGEAKIEDL+SQ Q  AA Q      +                  G      E     +DD EEVD TG+E KDIELVMTQA V R++AVKALK  D DIV++IM L+
Sbjct:   60 SIAKLGLTRVPGITRVTLRRPKNILFVINQPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTEEKKEEEEDDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 211          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_CAEEL (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis elegans GN=Y65B4BR.5 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.183e-32
Identity = 74/136 (54.41%), Postives = 93/136 (68.38%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEE-----VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KLG+K + GVSRV ++KSKNILFVI+KPDVFKSP SDTYI+FGEAKIEDL+   Q  A E  K            P+   + +D+ E      D TG+E KDIELV++QA   R++A++ALK AD DIV+AIM LT
Sbjct:   68 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLK-------PTREAPQLKTVEEDENEDVEFKEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVNAIMSLT 196          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_ASPOR (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus oryzae GN=egd2 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.823e-31
Identity = 73/148 (49.32%), Postives = 103/148 (69.59%), Query Frame = -3
Query:  202 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASK----------PESSAMVQDDEE----VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 603
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A            PE+    +++E+    VDE+G+E KDIELVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   54 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHEHDLGTKVPEAETKKEEEEDDGEPVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
The following BLAST results are available for this feature:
BLAST of CX046736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA2_HUMAN7.152e-3658.82Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPCL3.322e-3352.35Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEOFI9.666e-3351.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPFU9.666e-3351.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEBR1.649e-3257.25Nascent polypeptide-associated complex subunit alp... [more]
NACA_EMENI2.153e-3250.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_COCIM4.797e-3251.01Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOTFB6.266e-3250.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEEL8.183e-3254.41Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPOR1.823e-3149.32Nascent polypeptide-associated complex subunit alp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_9H07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9H07-P13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046736 ID=CX046736; Name=CX046736; organism=Citrus sinensis; type=EST; length=794bp
GCATAACAACATTCTTAGTAAAAGCTGTTTCATGCTGATACACAAGGGAA
AAAGAGGGGAAAAAAAAGAGAGAAAAGTTATAAAGCCAGCAAAAATCTGC
AACTTCAATTGTAAATGGTAACAGCGAGAAAAAAAAAAAAAAAAGATTTC
CTTATGGGATCATTCAGCAGAGCAACATAATTAAGAAAGTGACCATCAAT
TTGTTAGCTCCATAATGGCAGAAACGATGTCACCATCTGCGGCTTTGAGT
GCTTTCACAGCCCTTGACCTCGGTACCCCAGCTTGAGTCATTACCAACTC
AATGTCCTTTGGCTCCACACCAGTCTCATCTACTTCTTCGTCATCTTGAA
CCATGGCCGATGACTCAGGCTTTGATGCCACATTACCTGTGTTAGGAGGA
GGGACCTTGAACTGCTCTGCAGCCTGAGTTTGCAGTTGTGAACTCAGATC
CTCGATCTTTGCTTCCCCAAAGACAATGTATGTGTCAGATGTAGGACTCT
TGAAAACATCTGGTTTGGAGATAACAAACAAAATATTTTTGCTCTTTTTA
ACTGTAACTCGACTGACGCCAGGGATTGGCTTCATTCCAAGTTTCAACAT
TGCTTTCCGACTCTTCTTTTCACTCCTGCTCTGTTTTGAGCGACCACTTC
CATCTCCTTTCCCTTCCACATCGTCTTCATCCTTGTCATCATCCTCATCC
TCCTCATCATCATCCTCATCATCGTCGTCCTCGACTACAGGCTCATCGGG
GTTGAGCTTTTGCTCTTCAAGATGGGCAGCGAGGAGCTCTTCTT
back to top