CX046730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21 Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = -2 Query: 295 DSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 741 D L+ + L+PK++ V EQD N N R +EA Y+A+F+ L+ ++ R S ER+ VE+ +I NI+ACEG ER ER+E KW R +A F P+S + L++ C+ Y++ E+ + CW ++ L SAW Sbjct: 444 DELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21 Identity = 55/166 (33.13%), Postives = 85/166 (51.20%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK---------------VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 ++ L ++ + P+++ V EQ++NHN T ++R E+L+ Y+ +FD LE S + + ++ G +I N++ACEG ER ERHE L +W R A F V L QA LL + DGY++ E C+ + WH RPL + SAW Sbjct: 453 LEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAW 618
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21 Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLE-----------SSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 ++ L ++ + P+++ V EQ++NHN T ++R E+L+ Y+ +FD LE +S + + ++ G +I N++ACEG ER ERHE L +W R + F V L QA LL + DGYR+ E + C+ + WH RPL + SAW Sbjct: 461 LEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAW 622
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21 Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSM-----------ERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 ++ L ++ + P+++ V EQ++NHN + ++R E+L+ Y+ +FD LE S + + ++ G +I N++ACEG ER ERHE L +W R A F V L QA LL + DGYR+ E C+ + WH RPL + SAW Sbjct: 459 LEKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAW 620
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21 Identity = 55/165 (33.33%), Postives = 85/165 (51.52%), Query Frame = -2 Query: 295 MDSFLNSLWGLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLK--------------VEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSY-NCDGYRIAEDNRCVLICWHDRPLFSVSAW 744 ++ L ++ + P+++ V EQ++NHN + ++R E+L+ Y+ +FD LE S E + ++ G +I N++ACEG ER ERHE L +W R A F V L QA LL + DGY++ E C+ + WH RPL + SAW Sbjct: 449 LEKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAW 613
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.540e-19 Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = -2 Query: 295 NSLW---GLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 729 N+LW L+PKV+ V EQD +H G + + R +EA++ Y+ALFD L + S ER VE+ L EI+N++A G R K W ++F + F V L+ QA LL ++ DGY +AEDN + + W D L + SAW Sbjct: 631 NTLWLLQRLAPKVVTVVEQDLSHAG-SFLGRFVEAIHYYSALFDSLGACYGEESEERHAVEQQLLSREIRNVLAVGGPSRSGE-VKFNNWREKFQQSGFRGVSLAGNAAAQATLLLGMFHSDGYTLAEDNGALKLGWKDLCLLTASAW 776
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.808e-18 Identity = 55/151 (36.42%), Postives = 83/151 (54.97%), Query Frame = -2 Query: 286 NSLW---GLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAWSCR 729 ++LW L+PKV+ V EQD +H G + + R +EA++ Y+ALFD L +S S ER VE+ L +EI+N++A G R K E W ++ F + L+ QA LL + DGY + +DN + + W D L + SAW+ R Sbjct: 504 HTLWLLQRLAPKVVTVVEQDLSHAG-SFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWTPR 652
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17 Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = -2 Query: 295 NSLW---GLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 729 N+LW L+PKV+ + EQD +H+G + + R +EA++ Y+ALFD L++S S ER VE+ L EI+N++A G + K W ++ + F L+ QA LL + DGY + E+N + + W D L + SAW Sbjct: 514 NTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGG-PARTGDVKFGSWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAW 659
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17 Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = -2 Query: 295 NSLW---GLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 729 N+LW L+PKV+ + EQD +H+G + + R +EA++ Y+ALFD L++S S S ER VE+ L EI+N++A G + K W ++ + F L+ QA LL + DGY + E+N + + W D L + SAW Sbjct: 507 NTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGG-PARTGDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAW 652
BLAST of CX046730 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17 Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = -2 Query: 295 NSLW---GLSPKVMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLQARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 729 N+LW L+PKV+ + EQD +H+G + + R +EA++ Y+ALFD L++S S S ER VE+ L EI+N++A G + K W ++ + F L+ QA LL + DGY + E+N + + W D L + SAW Sbjct: 507 NTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGG-PARTGDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAW 652 The following BLAST results are available for this feature:
BLAST of CX046730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046730 ID=CX046730; Name=CX046730; organism=Citrus sinensis; type=EST; length=757bpback to top |