CX046723

Overview
NameCX046723
Unique NameCX046723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2445 contig Csv1_Contig2445:22..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12
Identity = 54/188 (28.72%), Postives = 95/188 (50.53%), Query Frame = -1
Query:  225 VYYSTSVFRSAGIESDVAA--SALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYF-LSVVNKFGISTVYLGFA-----TVCLLAVLYIAINVVETKGRSLEEIERALNP 764
            +YY+  VF++ G  +D+A   + +VG  N+  T +A   +D+ GRK L      G          +F  +  AP  G +A+L  + YV +F+            EIF + IR KA+A+++   W++N+ +   F +   N + ++  + GF+      + +LA L++   V ETKG++LEE+E    P
Sbjct:  297 LYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ--AP--GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEP 480          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12
Identity = 49/176 (27.84%), Postives = 81/176 (46.02%), Query Frame = -1
Query:  234 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEIERA 761
            YYST +F+ AG++  V A+   G  N   T V+  L++R GR++L      G          S   K    +   + +   +++V  F             E+F    R  A+A++   +W SNF++GL F S     G + V++ F    ++  ++    V ET+GR+ EEI RA
Sbjct:  290 YYSTGIFKDAGVQEPVYATIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDNYSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNWTSNFLVGLLFPSATFYLG-AYVFIVFTVFLVIFWVFTFFKVPETRGRTFEEITRA 464          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR3_BOVIN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12
Identity = 49/176 (27.84%), Postives = 81/176 (46.02%), Query Frame = -1
Query:  234 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEIERA 761
            YYST +F+ AG++  V A+   G  N   T V+  L++R GR++L      G          S   K    +   + +   +++V  F             E+F    R  A+A++   +W SNF++GL F S     G + V++ F    ++  ++    V ET+GR+ EEI RA
Sbjct:  290 YYSTGIFKDAGVQEPVYATIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDNYSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLG-AYVFIVFTVFLVIFWVFTFFKVPETRGRTFEEITRA 464          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12
Identity = 48/173 (27.75%), Postives = 80/173 (46.24%), Query Frame = -1
Query:  243 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEI 761
            YYSTS+F  AG++  V A+   G  N   T V+  +++R GR++L      G          +       P+   L+++    +V  F             E+F+   R  AVA++   +W SNF++G+ F  V    G   V++ F  + +L  ++    V ETKGR+ +EI
Sbjct:  292 YYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCG-PYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12
Identity = 48/173 (27.75%), Postives = 80/173 (46.24%), Query Frame = -1
Query:  243 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEI 761
            YYSTS+F  AG++  V A+   G  N   T V+  +++R GR++L      G          +       P+   L+++    +V  F             E+F+   R  AVA++   +W SNF++G+ F  V    G   V++ F  + +L  ++    V ETKGR+ +EI
Sbjct:  292 YYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCG-PYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: HXT17_YEAST (Hexose transporter HXT17 OS=Saccharomyces cerevisiae GN=HXT17 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = -1
Query:  240 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPY---------SGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLY--FLSVVNKFGISTVYLGFATVCLLAV-LYIAINVVETKGRSLEEIE 761
            +Y T++F+S G+      S ++G  N F T +A  ++D+ GR+  L F   G              K L P+         +G   ++ T  Y+  F+            E F S+++++A+++S   +W+  F+IG +  F++    F    V++G    CL+A+ LY+   + ET G SLEEI+
Sbjct:  338 FYGTTIFKSVGLTDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAAGMMACMVIFASIGV-KCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSRAMSISTACNWLWQFLIGFFTPFITGSIHFYYGYVFVG----CLVAMFLYVFFFLPETIGLSLEEIQ 518          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: HXT13_YEAST (Hexose transporter HXT13 OS=Saccharomyces cerevisiae GN=HXT13 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = -1
Query:  240 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPY---------SGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLY--FLSVVNKFGISTVYLGFATVCLLAV-LYIAINVVETKGRSLEEIE 761
            +Y T++F+S G+      S ++G  N F T +A  ++D+ GR+  L F   G              K L P+         +G   ++ T  Y+  F+            E F S+++++A+++S   +W+  F+IG +  F++    F    V++G    CL+A+ LY+   + ET G SLEEI+
Sbjct:  338 FYGTTIFKSVGLTDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAAGMMACMVIFASIGV-KCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSRAMSISTACNWLWQFLIGFFTPFITGSIHFYYGYVFVG----CLVAMFLYVFFFLPETIGLSLEEIQ 518          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12
Identity = 47/173 (27.17%), Postives = 80/173 (46.24%), Query Frame = -1
Query:  243 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEI 761
            YYSTS+F  AG++  V A+   G  N   T V+  +++R GR++L      G          +       P+   L+++    +V  F             E+F+   R  A+A++   +W SNF++G+ F  V    G   V++ F  + +L  ++    V ETKGR+ +EI
Sbjct:  190 YYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG-PYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 361          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12
Identity = 47/173 (27.17%), Postives = 80/173 (46.24%), Query Frame = -1
Query:  243 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEI 761
            YYSTS+F  AG++  V A+   G  N   T V+  +++R GR++L      G          +       P+   L+++    +V  F             E+F+   R  A+A++   +W SNF++G+ F  V    G   V++ F  + +L  ++    V ETKGR+ +EI
Sbjct:  251 YYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG-PYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 422          
BLAST of CX046723 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12
Identity = 47/173 (27.17%), Postives = 80/173 (46.24%), Query Frame = -1
Query:  243 YYSTSVFRSAGIESDVAASALVGASNVFGTAVASSLMDRQGRKSLLTFSFTGXXXXXXXXXXSFTWKVLAPYSGTLAVLGTVLYVLSFSXXXXXXXXXXXPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEI 761
            YYSTS+F  AG++  V A+   G  N   T V+  +++R GR++L      G          +       P+   L+++    +V  F             E+F+   R  A+A++   +W SNF++G+ F  V    G   V++ F  + +L  ++    V ETKGR+ +EI
Sbjct:  292 YYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLERLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG-PYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
The following BLAST results are available for this feature:
BLAST of CX046723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
XYLE_ECO571.379e-1228.72D-xylose-proton symporter OS=Escherichia coli O157... [more]
GTR3_SHEEP1.379e-1227.84Solute carrier family 2, facilitated glucose trans... [more]
GTR3_BOVIN1.379e-1227.84Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT1.801e-1227.75Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT1.801e-1227.75Solute carrier family 2, facilitated glucose trans... [more]
HXT17_YEAST2.352e-1226.88Hexose transporter HXT17 OS=Saccharomyces cerevisi... [more]
HXT13_YEAST2.352e-1226.88Hexose transporter HXT13 OS=Saccharomyces cerevisi... [more]
GTR1_SHEEP2.352e-1227.17Solute carrier family 2, facilitated glucose trans... [more]
GTR1_PIG2.352e-1227.17Solute carrier family 2, facilitated glucose trans... [more]
GTR1_MOUSE2.352e-1227.17Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9G12_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9G12-N23-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046723 ID=CX046723; Name=CX046723; organism=Citrus sinensis; type=EST; length=767bp
CCTGAGAATTTCAAAGAAACACATATATTTAACGAAAGTTGGTTGGGTTT
CAAATCTGTGCAAAACAGACCAAAATGAGAATCAGCAAACGAGATAGTCC
GGGAGATAGAATAAAGAAGGAAAGCTCTACAGAAGAAAATTGTCTTGCTT
ATTCAAGGTCAGTGTCCACGAGCCGCAGGGAGATTATTACCCACCCACTT
CTACCATTTTCAGTATCAAACTACTGGATTGAGAGCACGCTCTATCTCCT
CCAATGATCTTCCCTTTGTTTCTACAACATTAATGGCTATGTACAAGACG
GCAAGGAGACAGACGGTTGCAAATCCCAAATACACTGTACTGATTCCAAA
CTTGTTTACAACGCTCAAGAAGTACAGTCCGATAACAAAGTTTGAGATCC
AATGCATGCCTAATGACAAAGCAACCGCTTTTGCTCTGATTCTCGAGGCA
AAGATCTCTGGCAGGAGAAGAGCCGGCACAGGACCAGCACCAAGTGAAAA
GGATAATACATAGAGGACGGTCCCAAGAACAGCAAGGGTGCCAGAATATG
GTGCCAGGACTTTCCATGTGAAGGACAAGGAAAGCAGCAACATTGAAGCA
GCCATTCCAGTAAAGCTGAAGGTTAGAAGACTTTTTCTGCCTTGTCTGTC
CATCAAAGAGGATGCAACAGCAGTTCCAAAGACATTTGATGCTCCAACAA
GAGCACTTGCTGCGACATCAGATTCGATTCCAGCACTACGGAACACTGAA
GTAGAATAATAAACCCT
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