DN618385

Overview
NameDN618385
Unique NameDN618385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.502e-14
Identity = 35/93 (37.63%), Postives = 60/93 (64.52%), Query Frame = 1
Query:  187 ISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            ++  +G  +L DP+ NKG AFT  E+D   +RGL+PP   S + Q K+   ++ +   PL+K++ +  L+ RNE L+YK++++N  EL P++Y
Sbjct:   42 VTKKTGLDILNDPKLNKGSAFTADEKDRLGIRGLVPPRPQSLEAQYKRCKTNLDKISDPLEKFIYLNHLQNRNETLYYKMILENFVELAPIIY 134          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.502e-14
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 1
Query:  199 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            SG  LL  P  NKG AF+++ER A  L GLLPP   S + Q ++     R +E P+ K++ +  +++ NE LFY+LL D++EE++P++Y
Sbjct:   13 SGPNLLETPLLNKGSAFSKEERAAFNLTGLLPPRYESIEEQAERAYMQYRSFETPINKHIYLRAIQDNNETLFYRLLTDHLEEMMPIIY 101          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  211 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +L DP  NKG AF+  ERD  ++RGLLPP V+S + Q  + M  +++ EV           L K+  +  L +RNE L+YK+L++N+EE  P+VY
Sbjct:   52 ILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENIEEYAPIVY 146          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.312e-13
Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  211 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +LR+P  NKG  F  +ER+   L+GLLPP V S Q Q  + ++    +   L++Y+ +  L +RNE LFY LL +N+E ++P++Y
Sbjct:    8 ILRNPSANKGTGFNNEEREKLGLKGLLPPKVESLQEQSDRALSQFTSFNTNLERYIFLNCLRDRNETLFYYLLSNNLELMMPIIY 92          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.836e-12
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  202 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYE----------VPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            G  +L DP  NK   F   ERD   LRGLLPP VIS + Q  + M S R  E          V L K+  +  L +RNE L+Y++LIDN+++  P++Y
Sbjct:   32 GADILHDPWFNKDTGFPMTERDRLGLRGLLPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIY 129          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.190e-11
Identity = 32/89 (35.96%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  199 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +G  +L  P  NKG AFTE+ER    L GLLP A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++Y
Sbjct:   13 AGPAILEAPLINKGSAFTEEERIFFNLEGLLPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNIAEMMPIIY 101          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  202 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            G  +L  P  NKG+AFTE+ER    L+G LPP V++   Q K+           L K V +  L +RNE LFY+LL D++ E+LP+VY
Sbjct:   18 GLEVLSVPFLNKGVAFTEEERKELGLKGFLPPKVLTIDDQAKRAYEQYSAQPDDLSKNVYLTALHDRNETLFYRLLNDHLGEMLPIVY 105          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 33/89 (37.08%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  199 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++Y
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERANFNLHGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLSEMMPIIY 104          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 30/89 (33.71%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  199 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVY 465
            +GY LL  P  NKG AFT++ER    L GL+P  + + + Q ++       +   + K++ +  +++ NE LFY+L+ D++EE++P++Y
Sbjct:   17 AGYTLLELPLLNKGSAFTQEERSHFNLHGLIPHVIETIEEQSQRSYQQYGAFNDDINKHIYLRNIQDTNETLFYRLINDHLEEMMPIIY 105          
BLAST of DN618385 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.652e-11
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 1
Query:  211 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEV----------PLQKYVAMMELEERNERLFYKLLIDNVEELLPVV 462
            +L+DP  NKG AF+  ERD   LRGLLPP V++ + Q ++    +R  E+           L K+  +  L +RNE +F+K+LI+N+EE  P+V
Sbjct:   49 ILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMTTEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENIEEYAPIV 142          
The following BLAST results are available for this feature:
BLAST of DN618385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
MAOH_NEOFR1.502e-1437.63Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_IDILO1.502e-1441.57NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAOM_SOLTU3.700e-1341.05NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOX_DICDI6.312e-1340.00NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAON_SOLTU1.836e-1240.82NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAO1_SHEAM1.190e-1135.96NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO3_BACSU2.030e-1143.18Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO1_PECCP2.030e-1137.08NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_ACIAD2.030e-1133.71NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAOM_AMAHP2.652e-1139.36NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02H23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618385 ID=DN618385; Name=DN618385; organism=Citrus sinensis; type=EST; length=467bp
TGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAAT
GGAGAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCG
ACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGAT
CGTGCCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAG
CGGGTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCA
CTGAGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCT
GTTATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACA
ATATGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGA
GAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTT
CTCCCAGTCGTTTACAC
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