CX046677

Overview
NameCX046677
Unique NameCX046677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FAB1_MYCBO (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis GN=kasA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 8.114e-29
Identity = 57/146 (39.04%), Postives = 88/146 (60.27%), Query Frame = -1
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            ++++E+ EHA  RGA  +A  LG  +  DA+HM  P ADG+     +  SLE AG+SP +++++NAH T+T  GD AE NAI+          + A KS +GH +GA G LE++ TV  +  G + P++N   P+P ++ D VA +
Sbjct:  245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIR--VAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGE 388          

HSP 2 Score: 32.7278 bits (73), Expect = 8.114e-29
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = -2
Query:  358 AISNSFGFGGHNSVVAFSAF 417
            A++NSFGFGGHN  +AF  +
Sbjct:  397 AVNNSFGFGGHNVALAFGRY 416          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FAB1_MYCLE (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae GN=kasA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.375e-28
Identity = 58/146 (39.73%), Postives = 89/146 (60.96%), Query Frame = -1
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            ++++E+ EHA  RGA  +A  LG  +  DA+HM  P ADG+     +  SLE AG+S ++V+++NAH T+T  GD AE NAI+          + A KS +GH +GA G LE++ TV A+  G + P++N   P+P ++ D VA +
Sbjct:  245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSAKDVDHVNAHGTATPIGDSAEANAIR--VAGCEQAAVYAPKSALGHSIGAVGALESVLTVLALRDGVIPPTLNYQTPDPEIDLDIVAGE 388          

HSP 2 Score: 33.113 bits (74), Expect = 1.375e-28
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = -2
Query:  358 AISNSFGFGGHNSVVAFSAF 417
            AI+NSFGFGGHN  +AF  +
Sbjct:  397 AINNSFGFGGHNVALAFGRY 416          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: OXSM_MOUSE (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.945e-28
Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = -1
Query:  458 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFK-NTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFD 880
            VLV+E  EHA++RGA I AE LG  ++ DA H+T P  +G G   C+ ++++DAGVSPE+++Y+NAHATST  GD AE  AIK++F+ +   + I++TK   GH LGAAG +EA  T  A     L P++N    EP  EFD
Sbjct:  282 VLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAGVSPEQISYVNAHATSTPLGDAAENRAIKRLFRDHACALAISSTKGATGHLLGAAGAVEATFTALACYHQKLPPTLNLDCTEP--EFD 421          

HSP 2 Score: 25.0238 bits (53), Expect = 3.945e-28
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = -2
Query:  364 VAISNSFGFGGHNSVVAFS 420
            + ++NSFGFGG N+ +  +
Sbjct:  439 IGLTNSFGFGGTNATLCIA 457          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: NOE4_RHIME (Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.700e-28
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = -1
Query:  446 VMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVAN 874
            V+ES EHA  RGA I+AE  G  ++ DA+H+T P   G    S + + L DAG++ E+V+Y+NAH T T A D  E  AIK+VF  +   + I++TKS   HC+GAA  LE IA V AI  G + P+ N   P+P  + D   N
Sbjct:  231 VLESYEHATARGATILAEVAGVGLSADAFHITAPAVHG--PESAMRACLADAGLNAEDVDYLNAHGTGTKANDQNETTAIKRVFGDHAYSMSISSTKSTHAHCIGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPN 372          

HSP 2 Score: 30.0314 bits (66), Expect = 6.700e-28
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = -2
Query:  367 QQHEVNVAISNSFGFGGHNSVVAF 438
            ++ +V VA+SN+F  GG N+V+AF
Sbjct:  375 RERKVRVAMSNAFAMGGTNAVLAF 398          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: NODE_RHIME (Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.700e-28
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = -1
Query:  446 VMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVAN 874
            V+ES EHA  RGA I+AE  G  ++ DA+H+T P   G    S + + L DAG++ E+V+Y+NAH T T A D  E  AIK+VF  +   + I++TKS   HC+GAA  LE IA V AI  G + P+ N   P+P  + D   N
Sbjct:  232 VLESYEHATARGATILAEVAGVGLSADAFHITAPAVHG--PESAMRACLADAGLNAEDVDYLNAHGTGTKANDQNETTAIKRVFGDHAYSMSISSTKSTHAHCIGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPN 373          

HSP 2 Score: 30.0314 bits (66), Expect = 6.700e-28
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = -2
Query:  367 QQHEVNVAISNSFGFGGHNSVVAF 438
            ++ +V VA+SN+F  GG N+V+AF
Sbjct:  376 RERKVRVAMSNAFAMGGTNAVLAF 399          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: OXSM_HUMAN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.133e-27
Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = -1
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFK-NTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            VLV+E  EHA++R A I AE LG  ++ DA H+T P  +G G   C+ ++L+DAGV PEE++YINAHATST  GD AE  AIK +FK +   + +++TK   GH LGAAG +EA  T  A     L P++N    EP  + + V  K
Sbjct:  282 VLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLK 428          

HSP 2 Score: 25.0238 bits (53), Expect = 1.133e-27
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = -2
Query:  364 VAISNSFGFGGHNSVVAFS 420
            + ++NSFGFGG N+ +  +
Sbjct:  439 IGLTNSFGFGGTNATLCIA 457          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.513e-27
Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = -1
Query:  473 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN--TTG-IKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEP 880
            V+V+E  EHA +RGA I AE  G  ++ DA+H+T P  DG G    +  +L  +G+ P +++Y+NAHATST  GD  E  AIK VF    T+G +  ++TK   GH LGAAG +EAI ++ AI  G    ++N  NP+P
Sbjct:  284 VIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDP 422          

HSP 2 Score: 29.261 bits (64), Expect = 5.513e-27
Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = -2
Query:  361 VNVAISNSFGFGGHNSVVAFSA 426
            V  A+SNSFGFGG N+ + F++
Sbjct:  439 VRTAMSNSFGFGGTNASLLFAS 460          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: OXSM_SCHPO (Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC887.13c PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.354e-27
Identity = 57/133 (42.86%), Postives = 83/133 (62.41%), Query Frame = -1
Query:  491 LVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK----VFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSIN 877
            LV+E LEHA  R A I AE +G  +  D+YH+T P  +G      ++ SL+ AG+S  +++YINAHATST  GD+AE  AI +    V +N     ++++K  IGH LGAAG +E++ TV  +  G L P++N
Sbjct:  246 LVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLKQAGLSASQLDYINAHATSTKLGDVAESIAITRLLCDVNRNPEAFPVSSSKGSIGHLLGAAGAIESVYTVLTVQKGVLPPTLN 378          

HSP 2 Score: 35.4242 bits (80), Expect = 9.354e-27
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = -2
Query:  358 QQHEVNVAISNSFGFGGHNSVVAFSAF 438
            ++  +NVA+SNSFGFGG N+ + F  F
Sbjct:  398 KESRINVALSNSFGFGGTNASLCFKKF 424          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: OXSM_BOVIN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.216e-26
Identity = 64/147 (43.54%), Postives = 90/147 (61.22%), Query Frame = -1
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGI-KINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            VLV+E   HA++RGA + AE +G  ++ DA H+T P   G G   C+ ++++DAG+ PEEV+YINAHATST  GD AE  AIK++FK+   +  +++TK   GH LG AG  EA  T  A     L P++N    EP  + + V  K
Sbjct:  283 VLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAHVLAVSSTKGATGHLLGTAGAAEAAFTALACYHRKLPPTLNLDCTEPHFDLNYVPLK 429          

HSP 2 Score: 26.5646 bits (57), Expect = 1.216e-26
Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = -2
Query:  364 VAISNSFGFGGHNSVVAFS 420
            +A++NSFGFGG N+ +  +
Sbjct:  440 IALTNSFGFGGTNATLCIA 458          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: NODE_RHILV (Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.219e-26
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = -1
Query:  446 VMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVAN 874
            V+ES EHA  RGA ++AE  G  ++ DAYH+  P   G    + + + L DA ++ E+V+Y+NAH T T A D  E  AIK+VF  +   + I++TKS   HCLGAA  LE IA V AI  G + P+ N   P+P  + D   N
Sbjct:  232 VLESYEHAAARGATMLAEVAGIGLSADAYHIAAPAVHG--PEAAMRACLVDASLNAEDVDYLNAHGTGTKANDQIETTAIKRVFGDHARSMSISSTKSTHAHCLGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPN 373          

HSP 2 Score: 30.0314 bits (66), Expect = 1.219e-26
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = -2
Query:  367 QQHEVNVAISNSFGFGGHNSVVAF 438
            ++ +V VA+SN+F  GG N+V+AF
Sbjct:  376 RERKVRVAMSNAFAMGGMNAVLAF 399          
The following BLAST results are available for this feature:
BLAST of CX046677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
FAB1_MYCBO8.114e-2939.043-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
FAB1_MYCLE1.375e-2839.733-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
OXSM_MOUSE3.945e-2847.893-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
NOE4_RHIME6.700e-2843.75Nodulation protein E OS=Rhizobium meliloti GN=nodE... [more]
NODE_RHIME6.700e-2843.75Nodulation protein E OS=Rhizobium meliloti GN=nodE... [more]
OXSM_HUMAN1.133e-2746.263-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
KASM_ARATH5.513e-2743.883-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
OXSM_SCHPO9.354e-2742.86Putative 3-oxoacyl-[acyl-carrier-protein] synthase... [more]
OXSM_BOVIN1.216e-2643.543-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
NODE_RHILV1.219e-2642.36Nodulation protein E OS=Rhizobium leguminosarum bv... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9E09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9E09-J17-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046677 ID=CX046677; Name=CX046677; organism=Citrus sinensis; type=EST; length=880bp
TTTTAAATAAACCATAGCCCATCAGCTAAGATCTGAAATTCCCACATAAC
AAACAATGAAGAACAGAGCCACGAGTGATATTAATGCTAGACCTCGGCGG
CTCATTCTTCTGTCCACAGCATAATTAAAAATCTGACAAAATTTCATGCC
CTCTCAACTAGCCTCATAAATCCAATGGTTGAAAGGAGAAAATGGCTCAT
TATCCTGAACTAAAATCCAACTTACAATTATTACATAACTGTTACAAAAG
CCTCAAAATAAATATGCAGCAACTCAATAGACAGGATGATGCGGCTCCTT
GGCCAATTAATGACCAGATCTTCTAGACTTATGAACAGGCTGGATGATTC
ATGGTTTGAATGCAGAAAATGCAACGACAGAGTTGTGCCCTCCAAATCCA
AATGAATTAGAGATGGCAACATTCACTTCATGCTGCTGTTTTTTTGTTGG
CGACAGTGTCGAACTCAACTGAAGGTTCAGGGTTAAATTGATTAATGGAA
GGATGCAGCCATCCCGTGGTTATTGCCTTGACAGTGGCAATTGCTTCCAA
ACCCCCAGCTGCACCAAGGCAGTGCCCTATCATAGACTTCGTGGCATTGA
TTTTGATCCCTGTGGTGTTCTTGAACACCTTTTTAATAGCATTTATCTCA
GCCAGGTCACCAGCTAAAGTGGAAGTTGCGTGAGCATTTATGTAGTTGAC
CTCCTCAGGTGACACACCAGCATCTTCAAGGCTGCTCTCAATGCATGAAG
ACACTCCAAGTCCATCAGCTCTGGGGTCAGTCATATGATAAGCATCACAA
TTAACAGCACCCCCTAAGTACTCTGCTATGATCGGTGCACCTCGTTTCAT
TGCATGTTCCAAGCTCTCCATCACCAATAC
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