CX046677

Overview
NameCX046677
Unique NameCX046677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KAS1_STRRM (Oxytetracycline polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces rimosus PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  452 VMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK-VFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTV 874
            V+E   HA +RGA   AE  G A  C+AY MT  R+DG  ++  +  +L+ A V P EV+Y+NAH ++T   DL E  A K+ +  +   + I++ KSMIGH LGA   LE  A+   I  G + P+ N   P+P  + D V
Sbjct:  249 VLEEYAHARRRGARAYAEIAGYAGRCNAYSMTGLRSDGRELAEAVSRALDIARVDPSEVDYVNAHGSATKQNDLHETAAFKRSLGPHAYSVPISSIKSMIGHSLGAICALEVAASALRIEHGVIPPTANLREPDPDCDLDYV 390          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KAS1_STRCM (Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19
Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = -1
Query:  452 VMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTV 874
            V+E L  A +RGA I AE  G A   +AYHMT  R DG  ++  I  +L++A ++PE+V+YINAH + T   D  E  A KK   ++     +++ KSM+GH LGA G +E  A+  A+    + P+ N   P+P  + D V
Sbjct:  244 VLEELHSARRRGAHIYAEIAGYATRSNAYHMTGLR-DGAEMAEAIRLALDEARLNPEQVDYINAHGSGTKQNDRHETAAFKKALGEHAYRTPVSSIKSMVGHSLGAIGSIEIAASALAMEYDVVPPTANLHTPDPECDLDYV 384          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABB_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli (strain K12) GN=fabB PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.272e-19
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -1
Query:  491 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSIN 880
            ++V+E LEHA+ RGA I AE +G     D   M  P   G G   C++ ++         ++Y+N+H TST  GD+ E+ AI++VF + +   I+ATK+M GH LGAAG  EAI ++  +  G++ PSIN
Sbjct:  237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVDTP---IDYLNSHGTSTPVGDVKELAAIREVFGDKSPA-ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360          

HSP 2 Score: 27.7202 bits (60), Expect = 4.272e-19
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = -2
Query:  355 EVNVAISNSFGFGGHNSVVAFSAFK 429
            E+   +SNSFGFGG N+ +     K
Sbjct:  381 ELTTVMSNSFGFGGTNATLVMRKLK 405          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABB_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli O6 GN=fabB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.272e-19
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -1
Query:  491 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSIN 880
            ++V+E LEHA+ RGA I AE +G     D   M  P   G G   C++ ++         ++Y+N+H TST  GD+ E+ AI++VF + +   I+ATK+M GH LGAAG  EAI ++  +  G++ PSIN
Sbjct:  237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVDTP---IDYLNSHGTSTPVGDVKELAAIREVFGDKSPA-ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360          

HSP 2 Score: 27.7202 bits (60), Expect = 4.272e-19
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = -2
Query:  355 EVNVAISNSFGFGGHNSVVAFSAFK 429
            E+   +SNSFGFGG N+ +     K
Sbjct:  381 ELTTVMSNSFGFGGTNATLVMRKLK 405          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KAS1_STRGA (Tetracenomycin C polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19
Identity = 54/146 (36.99%), Postives = 81/146 (55.48%), Query Frame = -1
Query:  446 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK-VFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVAN 880
            V V+E L  A +RGA   AE  G A   +A+HMT  + DG  ++  I ++L+ A  + ++++YINAH + T   D  E  A K+ + +    + +++ KSMIGH LGA G LE  A   AI  G + P+ N   P+P  + D V N
Sbjct:  247 VFVLEELSAARRRGAHAYAEVRGFATRSNAFHMTGLKPDGREMAEAITAALDQARRTGDDLHYINAHGSGTRQNDRHETAAFKRSLGQRAYDVPVSSIKSMIGHSLGAIGSLELAACALAIEHGVIPPTANYEEPDPECDLDYVPN 392          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KASA_STRCO (Actinorhodin polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces coelicolor GN=SCO5087 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  452 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTV 880
            + V+E  + A+ RGA I AE  G A  C+AYHMT  +ADG  ++  I  +L+++     +++YINAH + T   D  E  A K+   ++     +++ KSM+GH LGA G LE  A V A+  G + P+ N    +P  + D V
Sbjct:  286 MFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYV 429          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KAS1_STRHA (Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces halstedii GN=sch1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 51/144 (35.42%), Postives = 84/144 (58.33%), Query Frame = -1
Query:  452 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK-VFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTV 880
            VLV+E LEHA  RGA +  E  G A   +A+HMT    +GL ++  I+++L+ A +   +++Y+NAH + T   D  E  A+K+ + ++     +++ KSM+GH LGA G +E +A V A+    + P+ N   P+P  + D V
Sbjct:  243 VLVLEELEHARARGADVYCELAGYATFGNAHHMTGLTREGLEMARAIDTALDMARLDGTDIDYVNAHGSGTQQNDRHETAAVKRSLGEHAYRTPMSSIKSMVGHSLGAIGSIEVVACVLALAHQVVPPTANYETPDPECDLDYV 386          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KAS1_STRCO (Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces coelicolor GN=SCO5318 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = -1
Query:  452 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK-VFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTV 880
            VLV+E LEHA  RGA +  E  G A   +AYHMT    +GL ++  I+++L+ A +    ++Y+NAH + T   D  E  A+K+ + ++     +++ KSM+GH LGA G +E  A V A+    + P+ N   P+P  + D V
Sbjct:  244 VLVLEDLEHARARGADVYCEVSGYATFGNAYHMTGLTKEGLEMARAIDTALDMAELDGSAIDYVNAHGSGTQQNDRHETAAVKRSLGEHAYATPMSSIKSMVGHSLGAIGSIELAACVLAMAHQVVPPTANYTTPDPECDLDYV 387          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KAS1_STRVN (Granaticin polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18
Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  452 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK-VFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTV 880
            + V+E  E A +RGA I AE  G A    AYHMT  + DG  ++  I ++L++A +    V+Y+NAH + T   D  E  A K+ + ++   + +++ KSM GH LGA G +E  A+V AI    + P+ N   P+P  + D V
Sbjct:  243 MFVLEEYEAAQRRGAHIYAEVGGYATRSQAYHMTGLKKDGREMAESIRAALDEARLDRTAVDYVNAHGSGTKQNDRHETAAFKRSLGEHAYAVPVSSIKSMGGHSLGAIGSIEIAASVLAIEHNVVPPTANLHTPDPECDLDYV 386          
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABB_BUCAP (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.297e-17
Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = -1
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            ++V+E L  A+ R A I AE +G A   D   M  P  DG     C+  + +   +    ++Y+N H TST  GDL E+ AIKK F +     I+ATKSM GH LG +G  E I T+  +   ++ PSIN    EPS +   +  K
Sbjct:  238 IIVIEELNCALSRSAHIYAEIIGYAATSDGKDMVVPSGDG--AVRCMNLAKKQNKML--FIDYLNVHGTSTKIGDLIELEAIKKSFFHEKKPMISATKSMTGHALGVSGVHEIIYTLLMMKYNFIAPSINIETIEPSADNMNIVQK 379          

HSP 2 Score: 26.9498 bits (58), Expect = 1.297e-17
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = -2
Query:  382 EVNVAISNSFGFGGHN 429
            ++  A+SNSFGFGG N
Sbjct:  384 KIKTALSNSFGFGGTN 399          
The following BLAST results are available for this feature:
BLAST of CX046677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KAS1_STRRM2.237e-2039.44Oxytetracycline polyketide putative beta-ketoacyl ... [more]
KAS1_STRCM1.894e-1938.73Putative polyketide beta-ketoacyl synthase 1 OS=St... [more]
FABB_ECOLI4.272e-1940.003-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Esc... [more]
FABB_ECOL64.272e-1940.003-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Esc... [more]
KAS1_STRGA5.509e-1936.99Tetracenomycin C polyketide putative beta-ketoacyl... [more]
KASA_STRCO7.195e-1936.11Actinorhodin polyketide putative beta-ketoacyl syn... [more]
KAS1_STRHA7.195e-1935.42Putative polyketide beta-ketoacyl synthase 1 OS=St... [more]
KAS1_STRCO9.397e-1936.11Putative polyketide beta-ketoacyl synthase 1 OS=St... [more]
KAS1_STRVN4.664e-1836.11Granaticin polyketide putative beta-ketoacyl synth... [more]
FABB_BUCAP1.297e-1736.993-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_9E09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9E09-J17-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046677 ID=CX046677; Name=CX046677; organism=Citrus sinensis; type=EST; length=880bp
TTTTAAATAAACCATAGCCCATCAGCTAAGATCTGAAATTCCCACATAAC
AAACAATGAAGAACAGAGCCACGAGTGATATTAATGCTAGACCTCGGCGG
CTCATTCTTCTGTCCACAGCATAATTAAAAATCTGACAAAATTTCATGCC
CTCTCAACTAGCCTCATAAATCCAATGGTTGAAAGGAGAAAATGGCTCAT
TATCCTGAACTAAAATCCAACTTACAATTATTACATAACTGTTACAAAAG
CCTCAAAATAAATATGCAGCAACTCAATAGACAGGATGATGCGGCTCCTT
GGCCAATTAATGACCAGATCTTCTAGACTTATGAACAGGCTGGATGATTC
ATGGTTTGAATGCAGAAAATGCAACGACAGAGTTGTGCCCTCCAAATCCA
AATGAATTAGAGATGGCAACATTCACTTCATGCTGCTGTTTTTTTGTTGG
CGACAGTGTCGAACTCAACTGAAGGTTCAGGGTTAAATTGATTAATGGAA
GGATGCAGCCATCCCGTGGTTATTGCCTTGACAGTGGCAATTGCTTCCAA
ACCCCCAGCTGCACCAAGGCAGTGCCCTATCATAGACTTCGTGGCATTGA
TTTTGATCCCTGTGGTGTTCTTGAACACCTTTTTAATAGCATTTATCTCA
GCCAGGTCACCAGCTAAAGTGGAAGTTGCGTGAGCATTTATGTAGTTGAC
CTCCTCAGGTGACACACCAGCATCTTCAAGGCTGCTCTCAATGCATGAAG
ACACTCCAAGTCCATCAGCTCTGGGGTCAGTCATATGATAAGCATCACAA
TTAACAGCACCCCCTAAGTACTCTGCTATGATCGGTGCACCTCGTTTCAT
TGCATGTTCCAAGCTCTCCATCACCAATAC
back to top