CX046677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: PKSF_BACSU (Polyketide biosynthesis malonyl-ACP decarboxylase pksF OS=Bacillus subtilis GN=pksF PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = -1 Query: 479 LVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNP 877 LV+E E A++RG A G ++ D DP +G I+ +LE A + PE+++YIN H T + GD E+ A++ + INATKS+ GH L AAG +E I+ + + LHPS N +P Sbjct: 241 LVIERKETALRRGLKPYAALSGWSIKLDGNRNPDPSLEG--EIHVIQKALERARLLPEDIDYINPHGTGSFIGDEIELKALRAC--RLSHAYINATKSITGHGLSAAGIVEIISVLLQMKKSALHPSRNLDHP 369
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: PKS16_DICDI (Probable polyketide synthase 16 OS=Dictyostelium discoideum GN=pks16 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13 Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = -1 Query: 458 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYH----MTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT----TGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFD 880 V +++ A+K G I GG+ N D Y+ +T P G + IE +L+ +GV+P ++ YI AH T T GD EI AI ++FK+ + I + KS IGH AAG I ++ L P+I+ P P ++F+ Sbjct: 248 VCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNITQPSMKAQGEN--IEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFE 394
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.608e-13 Identity = 53/172 (30.81%), Postives = 74/172 (43.02%), Query Frame = -1 Query: 458 VLVMESLEHAMKRGAPIIAEYLG------GAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKIN-------------------------ATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFD 880 V+V++SLE A G I G GA N D +T P + ++ I ++E A +SP ++ YI AH T T GD E+ A+ K+F N+ ++N + KS IGH AAG I + L PSIN N PS+ FD Sbjct: 249 VVVLKSLEQAKLDGDRIYGVIKGVSSNEDGASNGDKNSLTTPSCEAQSIN--ISKAMEKASLSPSDIYYIEAHGTGTPVGDPIEVKALSKIFSNSNNNQLNNFSTDGNDNDDDDDDNTSPEPLLIGSFKSNIGHLESAAGIASLIKCCLMLKNRMLVPSINCSNLNPSIPFD 418 HSP 2 Score: 23.8682 bits (50), Expect = 9.608e-13 Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = -2 Query: 382 VNVAISNSFGFGGHN 426 VN+ I NSFGFGG N Sbjct: 437 VNIGI-NSFGFGGSN 450
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: PKS17_DICDI (Probable polyketide synthase 17 OS=Dictyostelium discoideum GN=pks17 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 48/149 (32.21%), Postives = 74/149 (49.66%), Query Frame = -1 Query: 458 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYH----MTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT----TGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFD 880 V +++ A+K G I GG+ N D Y+ + P G + IE +L+ +GV+P ++ YI AH T T GD EI AI ++FK+ + I + KS IGH AAG I ++ L P+I+ P P ++F+ Sbjct: 248 VCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGEN--IEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFE 394
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: ERYA3_SACER (Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=4) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = -1 Query: 458 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF----KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFD 880 VLV++ L A + G P++A G AVN D G I +LE+AGV +V+Y+ AH T T GD E++A+ + + I + KS IGH AAG + V A+ G + +++ P P +E+D Sbjct: 268 VLVLQRLSAARREGRPVLAVLAGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWD 412
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: PKS24_DICDI (Probable polyketide synthase 24 OS=Dictyostelium discoideum GN=pks24 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 44/150 (29.33%), Postives = 73/150 (48.67%), Query Frame = -1 Query: 461 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPR----ADGLGVSSCIESSLEDAG--VSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT----TGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEF 880 V+V+++L+ A+K G I G + N D +D + S ++++++ V P +++Y+ AH T T GD E+ I KVFK+T T + I + KS IGHC A+G I P+I+ P P+++F Sbjct: 260 VVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKF 409 The following BLAST results are available for this feature:
BLAST of CX046677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046677 ID=CX046677; Name=CX046677; organism=Citrus sinensis; type=EST; length=880bpback to top |