CX046662

Overview
NameCX046662
Unique NameCX046662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP255_MOUSE (Cytochrome P450 2C55 OS=Mus musculus GN=Cyp2c55 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.723e-14
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = -3
Query:  211 HTRDTV--VKATALILILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEY-VPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGT 771
            H+  T+  + AT   + + G+E+T + + + + LLL H +   K Q E+D  +GR R     D  ++ Y  A+V E  R     P      A  +     Y +PKGT L+ ++  +  D + + NP  F P  FL    D + N +  +Y +PFS G+R C G       + L L  ILQ F+L ++  T
Sbjct:  279 HSEFTIESLMATVTDIFVAGTETTNITLRYGLLLLLKHTEVTAKVQAEIDHVIGRHRSPCMQDRTRMPYTDAMVHEIQRYIDLIPNNVPHAATCNVRFRSYFIPKGTELVTSLTSVLHDDKEFPNPEVFDPGHFL----DENGNFKKSDYFMPFSIGKRMCVGEALARTELFLILTTILQNFNLKSLVDT 464          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP1A2_CHICK (Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.723e-14
Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = -3
Query:  370 GSESTYLGIIWTMSLLLNHPKELKKAQE-ELDVHVGRDR--WVNESDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLT 720
            G ++    + W++  L+  P   KK QE ELD  +GR+R  W++E  M  L Y  A + ET+  +   P T       D  + G+H+PK   + VN W+++ +  +WE+P  FR ERFLT
Sbjct:   55 GFDTVTTALSWSLMYLVTQPHSQKKIQESELDTAIGRERRSWLSERSM--LPYKEAFILETVPTWQFVPFTIPHSTTRDTTLNGFHIPKECCVFVNQWQVNHEAELWEDPFVFRTERFLT 172          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP4FC_HUMAN (Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 56/197 (28.43%), Postives = 97/197 (49.24%), Query Frame = -3
Query:  235 VLLSKLQEDAVMGGHTRDTVVKATALILILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNE---SDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI-GGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGF 813
            VLL    ED   G    D  ++A A   +  G ++T  G+ W +  L  HP+  ++ ++E+   + +DR   E    D+ +L +L   VKE+LR++PP P    R   +D  +  G  +PKG   +++I  +H +P +W +P  + P RF     +         ++PFS G R+C G    +  +++ LA +L  F
Sbjct:  301 VLLLSKDED---GKALSDEDIRAEADTFMFGGHDTTASGLSWVLYNLARHPEYQERCRQEVQ-ELLKDRDPKEIEWDDLAQLPFLTMCVKESLRLHPPAPFIS-RCCTQDIVLPDGRVIPKGITCLIDIIGVHHNPTVWPDPEVYDPFRF---DPENSKGRSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALMLLHF 489          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = -3
Query:  250 GGHTRDTVVKATALILILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNE---SDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI-GGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQ----IVQLTLAR 777
            G    D  ++A A   +  G ++T   + W +  L  HP+  ++ ++E+   + RDR   E    D+ +L +L   +KE+LR++PP  +  +R   +D  +  G  +PKG   +++I+ +H +P +W +P  F P RF + +           ++PFS G R+C G T  +     +V LTL R
Sbjct:  312 GKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEV-WELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPA-IDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVFDPFRFDSENRQ---KRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLR 490          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP2CQ_MESAU (Cytochrome P450 2C26 OS=Mesocricetus auratus GN=CYP2C26 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 55/172 (31.98%), Postives = 80/172 (46.51%), Query Frame = -3
Query:  220 LILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEY-VPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 732
            L   G+E+T   + + + LLL HP    K QEE+D  VGR R     D   + Y  A++ E  R     P         D +   Y +PKGT +I ++  +  D + + NP  F P  FL    D + N +  +Y +PFS G+R C G       + L L  ILQ F L ++
Sbjct:  294 LFAAGTETTSTTLRYALLLLLKHPHVTAKVQEEIDQVVGRHRNPCMQDRSHMPYTDAMIHEVQRFIDLIPTNLPHAVTCDIKFRDYFIPKGTTIITSLSSVLHDSKEFPNPEVFDPGHFL----DKNGNFKKSDYFMPFSTGKRMCAGEGLARMELFLFLTTILQNFKLKSL 461          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: C4AD1_DROME (Probable cytochrome P450 4ad1 OS=Drosophila melanogaster GN=Cyp4ad1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 56/178 (31.46%), Postives = 92/178 (51.69%), Query Frame = -3
Query:  208 ILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKKLK---YLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFD-LATVGGTP 729
            I TG +     I +T+  L  H +  +KA EE     G + +  E+D+ +L    YL  I++ETLR+YP  P+   R      +I G  V K T +I+ +  +  + + +++PC FRPERF     +V +  + F+ VPFS G R C      +  ++  L+++L+ F+ L  V G P
Sbjct:  303 IFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFG-ENFAGEADLARLDQMHYLELIIRETLRLYPSVPLIA-RTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGI--EAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLP 476          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: C12B2_DROME (Probable cytochrome P450 12b2, mitochondrial OS=Drosophila melanogaster GN=Cyp12b2 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 50/188 (26.60%), Postives = 94/188 (50.00%), Query Frame = -3
Query:  196 LILTGSESTYLGIIWTMSLLLNHPKELKKAQEEL--DVHVGRDRWVNESDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNT-------QHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVDMQ 732
            +++ G ++T    +  +  L  +P + +K + EL   +   +D  + + + K + YLRA +KE LRI    P    R   +D  + GY VP+GT +++ + +L  D + +    EF PER+L +    D+           F Y+PF FG R+C G       ++  L R+L+ + ++ +  TP++ +
Sbjct:  328 MLMAGIDTTSSACLTILYHLARNPSKQEKLRRELLRILPTTKDS-LTDQNTKNMPYLRACIKEGLRITSITP-GNFRITPKDLVLSGYQVPRGTGVLMGVLELSNDDKYFAQSSEFIPERWLKSDLAPDIQACPAARTRNPFVYLPFGFGPRTCIGKRIAELEIETLLVRLLRSYKVSWLPETPIEYE 513          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: C11B1_SHEEP (Cytochrome P450 11B1, mitochondrial OS=Ovis aries GN=CYP11B1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 58/204 (28.43%), Postives = 100/204 (49.02%), Query Frame = -3
Query:  157 TRDTVVKATALILILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVDMQIGLGLALPKSNPL 768
            T DT+ KA  + L     ++T   ++ T+  L  +P+  +  ++E  V   R     +    +L  LRA +KETLR+YP G +T  R+   D  +  YH+P GT + V ++ L R+P ++  P  + P+R+L    D   +   F ++ F FG R C G       + L L  +L+ F + T+    + M +   + +P + PL
Sbjct:  300 TLDTI-KANTIDLTAGSVDTTAFPLLMTLFELARNPEVQQALRQESLVAEARISENPQRATTELPLLRAALKETLRLYPVG-ITLERQVSSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPESYHPQRWL----DRQGSGSRFPHLAFGFGMRQCLGRRVAEVEMLLLLHHVLKNFLVETLAQEDIKM-VYRFILMPSTLPL 496          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.056e-14
Identity = 46/178 (25.84%), Postives = 84/178 (47.19%), Query Frame = -3
Query:  226 VKATALILILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI--GGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLA 753
            ++A     +  G ++T   I W +  L  +P+  ++ ++E+   +G    +    + ++ Y    +KE LR+Y   PV  I   ++       G  +P G  + +NIW LH +P  WE+P  F P RF   +++       + ++PFS G R+C G    +   ++ +A  L  F LA
Sbjct:  304 LQAEVKTFMFAGHDTTSSAISWILYCLAKYPEHQQRCRDEIRELLGDGSSITWEHLSQMPYTTMCIKECLRLY--APVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQVFNPLRFSRENSE---KIHPYAFIPFSAGLRNCIGQHFAIIECKVAVALTLLRFKLA 476          
BLAST of CX046662 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.056e-14
Identity = 55/196 (28.06%), Postives = 95/196 (48.47%), Query Frame = -3
Query:  235 VLLSKLQEDAVMGGHTRDTVVKATALILILTGSESTYLGIIWTMSLLLNHPKELKKAQEELDVHVGRDRWVNE---SDMKKLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGF 813
            VLL    ED   G    D  ++A A   +  G ++T  G+ W +  L  HP+  ++ ++E+   + +DR   E    D+ +L +L   +KE+LR++PP PV       +     G  +PKG   ++NI  +H +P +W +P  + P RF   + +         ++PFS G R+C G    +  +++ LA  L  F
Sbjct:  301 VLLLSKDED---GKELSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQEQCRQEVQ-ELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVPVISRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVWPDPEVYDPFRF---NQENIKERSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLHF 489          
The following BLAST results are available for this feature:
BLAST of CX046662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP255_MOUSE4.723e-1430.00Cytochrome P450 2C55 OS=Mus musculus GN=Cyp2c55 PE... [more]
CP1A2_CHICK4.723e-1435.00Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN... [more]
CP4FC_HUMAN6.168e-1428.43Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE... [more]
CP4F5_RAT6.168e-1428.26Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP2CQ_MESAU6.168e-1431.98Cytochrome P450 2C26 OS=Mesocricetus auratus GN=CY... [more]
C4AD1_DROME6.168e-1431.46Probable cytochrome P450 4ad1 OS=Drosophila melano... [more]
C12B2_DROME6.168e-1426.60Probable cytochrome P450 12b2, mitochondrial OS=Dr... [more]
C11B1_SHEEP6.168e-1428.43Cytochrome P450 11B1, mitochondrial OS=Ovis aries ... [more]
CP4Z1_HUMAN8.056e-1425.84Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP4FB_HUMAN8.056e-1428.06Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9D10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9D10-H19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046662 ID=CX046662; Name=CX046662; organism=Citrus sinensis; type=EST; length=815bp
CGAAAAAGATCCTTCACTTAGAAAAAATGTTATTGCGCATTAGTCGCCTT
CACATTAGTTCTTTCTGATAATACACGTAAATGATCGTTTAAAATGATAA
AATCTTCAAATGCATCGAAAAAGATCCTCAGCGAGGCGAGGTTTTATGAT
AACTTCAAGAGGGTTCGATTTGGGCAAGGCAAGGCCCAAACCAATCTGCA
TATCAACAGGTGTGCCCCCCACGGTTGCCAAATCAAACCCCTGAAGAATC
CGAGCAAGCGTTAATTGAACAATTTGTAAGCCAGATGTCATTCCAGGGCA
CGATCTTCTTCCGAAGCTGAACGGAACATACTCAAAATGTTGAGTGTTGA
CATCAACATCAGCATGAGTTGTCAGAAACCTTTCTGGTCTGAACTCGCAC
GGATTTTCCCACATCCGAGGGTCTCTGTGCAGCTTCCATATGTTCACGAT
CAAACGCGTGCCTTTCGGGACATGATAACCACCAATTTCACAATCTTCCA
TGGCTTCCCGAATTCCTGTTACAGGACCCGGTGGGTAAATCCGTAGAGTT
TCTTTGACAATGGCTCGAAGGTATTTTAGTTTCTTCATATCTGACTCGTT
TACCCATCTATCTCTTCCAACATGGACGTCCAACTCTTCCTGTGCCTTCT
TCAGCTCTTTCGGGTGGTTCAACAACAGGGACATTGTCCAAATTATTCCA
AGATACGTGCTTTCTGAGCCTGTAAGGATTAAAATTAGAGCTGTTGCTTT
GACGACAGTATCACGTGTATGTCCGCCCATCACAGCATCTTCTTGCAGTT
TTGAAAGCAACACGT
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