DN618344

Overview
NameDN618344
Unique NameDN618344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_CHICK (Translationally-controlled tumor protein homolog OS=Gallus gallus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.690e-14
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDG 498
            M++Y+D ++ DE+ SD +  +E  NG+  EVEGK V +    +D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  +L E + E  K  + GA    K +L+   + QFFVGE+M+ DG
Sbjct:    1 MIIYRDCISQDEMFSDIYKIREVANGLCLEVEGKMVTRTEGQIDDSLIGGNASAEGPEGEGTEATVITG-VDIVINHHLQE-TSFTKESYKKYIKDYMKAIKARLEEHKPERVKPFMTGAAEQIKHILANFKNYQFFVGENMNPDG 144          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14
Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDG 498
            M++Y+DL++ DE+ SD +  +E   G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QF++GE+M+ DG
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDG 144          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_THEAN (Translationally-controlled tumor protein homolog OS=Theileria annulata GN=TCTP PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            M VY+DL + DE+ SD++    P+   + + + +EV+   V +G  D  IG N                  VVD+VD F LQ  P   KK + +Y+K++I+ L   L E   ER E FK ++    K +L+   D +F+VGES+  +  LV+ Y
Sbjct:    1 MKVYRDLYSNDEVCSDAYDHLDPFDNPDLSSVAFEVKTSKVAKGEEDYGIGYNDEEGGDQMNVDPNVEV--VVDVVDKFALQSLP-LTKKDYSSYIKKYIQRLVATLQEKNPERVEPFKTSVSEFVKHVLANFDDFEFYVGESLDYEAGLVYGY 151          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_WUCBA (Translationally-controlled tumor protein homolog OS=Wuchereria bancrofti PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.824e-13
Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESM 486
            ML+++D  T DEL SDSFP K  + G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I+     LLSK     LQFF+GE M
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLATFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIQAWVVSLLSKDRFKQLQFFIGERM 144          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_BRUMA (Translationally-controlled tumor protein homolog OS=Brugia malayi PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.217e-13
Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESM 486
            ML+++D  T DEL SDSFP K  + G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I      LLSK     LQFF+GE M
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLVTFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIPAWVVSLLSKDRFKQLQFFIGERM 144          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_THEPA (Translationally-controlled tumor protein homolog OS=Theileria parva GN=TCTP PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12
Identity = 50/154 (32.47%), Postives = 79/154 (51.30%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            M VY+DL + DE+ SD++    P+   + + + +EV+   V +G  D  IG N                  VVD+VD F LQ   +  KK + +Y++++I+ L   L E   ER E FK  +    K +L+   D +F+VGES+  +  LV+AY
Sbjct:    1 MKVYKDLYSNDEVCSDAYDHHDPFDNADLSSVAFEVKTSKVPKGEEDYGIGYNDEEGADQMNVDPNVEM--VVDVVDKFGLQSL-SLTKKDYSSYIRKYIQRLVATLQEKNPERVEPFKTTVSDFVKHVLANFEDFEFYVGESLDYEAGLVYAY 151          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_USTMA (Translationally-controlled tumor protein homolog OS=Ustilago maydis GN=UM01283 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = 1
Query:  115 LLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 498
            + SD +  K  E+ +++EV+   +V    DVDIGANPS               +V++IV +FRLQ    FDKK ++ Y+K ++K +  KL+E   +R   F+K      K ++   +D +FF GESM  +G
Sbjct:    1 MCSDGYEMKLVED-VVYEVDAAKIVVSDGDVDIGANPSAEEAAEALENGAE--QVINIVHSFRLQSTQ-FDKKSYLAYLKGYMKSVKAKLAESNPDRVPAFEKGAAAFAKKIVGSFNDWEFFTGESMDPEG 127          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_XENLA (Translationally-controlled tumor protein homolog OS=Xenopus laevis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLL---TPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDG 498
            M++Y+D +T DE+ SD +   ET +G+  EVEGK +   +GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++K L     K + ER   F K  +   K +L    + QF+ GE M+ DG
Sbjct:    1 MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQE-TGFTKDSYKNYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDG 144          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_TRIPS (Translationally-controlled tumor protein homolog OS=Trichinella pseudospiralis PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.085e-12
Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVG 477
            M++Y+DL +GDEL SD+FP K   N +++E  GK VV+   +V + GANPS                 +DIV   +L E P + D K F  ++K ++K L  K+     SEE    FKKN++     LL K    +LQFF G
Sbjct:    1 MIIYRDLFSGDELCSDTFPMK-LVNDVVFEFTGKHVVRKLGEVTLEGANPSAEEFDEGTEEQMESG--IDIVLNHQLMEMPMYQDIKIFKDWIKEYMKKLVEKMKSDGESEESISKFKKNMQEYVTSLLKKDRFKELQFFSG 139          
BLAST of DN618344 vs. ExPASy Swiss-Prot
Match: TCTP_PLACH (Translationally-controlled tumor protein homolog OS=Plasmodium chabaudi GN=TCTP PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 47/154 (30.52%), Postives = 78/154 (50.65%), Query Frame = 1
Query:   79 MLVYQDLLTGDELLSDSF----PYKETE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 516
            M VY+D+ T DE+ SDS+    P+   E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  L+++Y
Sbjct:    1 MKVYKDIFTNDEVCSDSYAQEDPFGNPEFREIAFEVKSNKRIKGNDDYGIADNSEDAVEGMGADVEH----VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVEIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSY 149          
The following BLAST results are available for this feature:
BLAST of DN618344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
TCTP_CHICK5.690e-1434.25Translationally-controlled tumor protein homolog O... [more]
TCTP_RABIT9.706e-1434.25Translationally-controlled tumor protein OS=Orycto... [more]
TCTP_THEAN2.162e-1333.12Translationally-controlled tumor protein homolog O... [more]
TCTP_WUCBA2.824e-1335.86Translationally-controlled tumor protein homolog O... [more]
TCTP_BRUMA8.217e-1335.86Translationally-controlled tumor protein homolog O... [more]
TCTP_THEPA1.402e-1232.47Translationally-controlled tumor protein homolog O... [more]
TCTP_USTMA5.326e-1234.35Translationally-controlled tumor protein homolog O... [more]
TCTP_XENLA6.956e-1231.72Translationally-controlled tumor protein homolog O... [more]
TCTP_TRIPS9.085e-1237.32Translationally-controlled tumor protein homolog O... [more]
TCTP_PLACH1.186e-1130.52Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618344 ID=DN618344; Name=DN618344; organism=Citrus sinensis; type=EST; length=517bp
CTGCGTCTCTCTCTCTCTCTCTCCAGTTTTCTCCGTTGATTATTTTTCTT
TTTTGTGTTCGCGAGAGAGACTGCAATCATGTTGGTCTATCAAGATCTCC
TCACCGGTGATGAGCTTCTCTCCGACTCTTTTCCCTACAAGGAAACTGAG
AATGGGATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTACAAGGAGCCGT
TGATGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATG
AGGGTGTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTC
AGGCTGCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACAT
GAAGAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGG
AGATATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAG
CTCAGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCATGATGATGGCTG
TCTTGTCTTTGCTTACT
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