CX046624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_GIBZE (COP9 signalosome complex subunit 5 OS=Gibberella zeae GN=RRI1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 476 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAE 811 SSLD HLL+LLW+KYWV TLS +PL+ N DY Q+ DL+ K+++A ++ +R G + K D + K+ +++ I ++ GL++ +K LFN + +E Sbjct: 229 SSLDSHLLELLWHKYWVQTLSQNPLITNRDYGNKQLLDLSSKIKEATTGITRNRAGQGMMMGMSTKSSDKAVDKLAKEANLIASKERSGLIANQVKASLFNDLGSKANPTSE 340
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNE (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans GN=RRI1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.005e-14 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = -1 Query: 506 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAP-PPRRK-----------------------EEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNS 811 S LD +LDLLWNKYWV TLSS+ L+ N +Y Q+ DL KL A +S+S + P P K EE++ L K+T++S++IT E +G++SQ++K+ LFN+ Sbjct: 227 SKLDEKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQPTTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLFNT 352
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans GN=rri1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = -1 Query: 503 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR----RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 811 S+LD +L LLWNKYWV TLS SPL DY + Q+ DL++K + + + PPR + D QL ++ +D +I E+V GL++ +K LF + Sbjct: 228 SALDTEILSLLWNKYWVATLSQSPLFTTRDYGSKQMLDLSQKTRRVARGIESN--------PPRGGAPTQVRDQQLERVVKDGQRIVSEEVKGLLAAEVKMQLFQGI 326 The following BLAST results are available for this feature:
BLAST of CX046624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046624 ID=CX046624; Name=CX046624; organism=Citrus sinensis; type=EST; length=811bpback to top |