CX046622 | Citrus Genome Database

Overview


Name	CX046622
Unique Name	CX046622
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	820

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 2.511e-124
Identity = 198/232 (85.34%), Postives = 218/232 (93.97%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+IS+EKAYHEQLS AEITNS FEP+ MM  CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRI
Sbjct:  160 DYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 2.511e-124
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 417.927 bits (1073), Expect = 4.690e-123
Identity = 205/232 (88.36%), Postives = 216/232 (93.10%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYP +        P   +EKAYHEQLS AEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVP GD AKV RAVCMISNST++AEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPSVIIR-----PSTPAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPSGDPAKVMRAVCMISNSTAIAEVFSRI 386

HSP 2 Score: 43.5134 bits (101), Expect = 4.690e-123
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  387 DHKFDLMYAKRAFVHWY 403

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 8.759e-122
Identity = 202/232 (87.07%), Postives = 220/232 (94.83%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVST+VVEPYNSVL+THSLLEHTDVAV+LDNEAIY+IC+RSL+IERPTYTNLNRL++QVISS+TASLRFDGALNVD+TEFQTNLVPYPRIHFMLSS APVIS E A HEQ S AEITN+AFEP+SMMAKCDPR GKYMACCLM+RGDV PKDVN +VA IKTK+TIQFVDWCPTGFKCGINYQPPTVVP GDLAKV RAVCMISNST+++EVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVLDNEAIYEICQRSLNIERPTYTNLNRLIAQVISSITASLRFDGALNVDITEFQTNLVPYPRIHFMLSSLAPVISLEMANHEQYSTAEITNAAFEPNSMMAKCDPRRGKYMACCLMFRGDVAPKDVNGSVAAIKTKKTIQFVDWCPTGFKCGINYQPPTVVPDGDLAKVDRAVCMISNSTAISEVFSRI 391

HSP 2 Score: 36.965 bits (84), Expect = 8.759e-122
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3

Query:  774 KFDLMYAKRAFVHWY 818
            KFDLMY+KRAFVHWY
Sbjct:  394 KFDLMYSKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 8.759e-122
Identity = 191/232 (82.33%), Postives = 221/232 (95.26%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQLS AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T+VAE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 8.759e-122
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 1.143e-121
Identity = 190/232 (81.90%), Postives = 221/232 (95.26%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQL+ AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T+VAE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.143e-121
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 1.491e-121
Identity = 189/232 (81.47%), Postives = 221/232 (95.26%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQL+ AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.491e-121
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 1.491e-121
Identity = 189/232 (81.47%), Postives = 221/232 (95.26%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQL+ AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.491e-121
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1D_BOVIN (Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.946e-121
Identity = 189/232 (81.47%), Postives = 220/232 (94.83%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQLS AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.946e-121
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.946e-121
Identity = 189/232 (81.47%), Postives = 221/232 (95.26%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQLS AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.946e-121
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.946e-121
Identity = 189/232 (81.47%), Postives = 221/232 (95.26%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS+EKAYHEQLS AEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+
Sbjct:  160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.946e-121
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

The following BLAST results are available for this feature:

BLAST of CX046622 vs. ExPASy Swiss-Prot

BLAST of CX046622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 419


Match Name	E-value	Identity	Description
TBA2_PELFA	2.511e-124	85.34	Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TU...	[more]
TBA1_STYLE	4.690e-123	88.36	Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S...	[more]
TBAN_GUITH	8.759e-122	87.07	Tubulin alpha chain, nucleomorph OS=Guillardia the...	[more]
TBA1C_BOVIN	8.759e-122	82.33	Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=...	[more]
TBA1C_HUMAN	1.143e-121	81.90	Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C P...	[more]
TBA1C_MOUSE	1.491e-121	81.47	Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c P...	[more]
TBA1C_CRIGR	1.491e-121	81.47	Tubulin alpha-1C chain OS=Cricetulus griseus GN=TU...	[more]
TBA1D_BOVIN	1.946e-121	81.47	Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=...	[more]
TBA1B_RAT	1.946e-121	81.47	Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tub...	[more]
TBA1B_PIG	1.946e-121	81.47	Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS07_9B10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9B10-D19-1-7.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX046622 ID=CX046622; Name=CX046622; organism=Citrus sinensis; type=EST; length=820bp
TGTTTTCATGCTGTTGGTGGACGTATTTGGCTCTGGTCTTGGGTCTCTTC
TTCTGGAGAGGTTGTCTGTTGACTATGGAAAGAAGTCAAAGTTGGGCTTC
ACTGTCTACCCATCTCCTCAGGTCTCCACATCTGTTGTTGAGCCTTACAA
CAGTGTCCTCTCAACCCACTCCCTGTTGGAGCATACTGATGTGGCTGTTC
TTCTCGACAATGAGGCCATTTATGACATCTGCAGGCGCTCCCTTGACATT
GAACGTCCTACCTATACTAACCTCAATAGACTTGTTTCTCAGGTAATTTC
TTCATTGACTGCCTCACTGAGGTTTGATGGTGCTTTGAATGTGGATGTGA
CTGAATTCCAAACCAACTTGGTCCCATACCCAAGAATCCACTTCATGCTT
TCCTCCTATGCACCAGTCATCTCATCTGAGAAGGCCTACCATGAACAACT
CTCATTTGCTGAGATCACCAACAGTGCCTTTGAGCCCTCATCTATGATGG
CCAAATGTGATCCTCGTCATGGCAAGTACATGGCTTGCTGCCTTATGTAC
CGCGGTGATGTTGTGCCCAAGGATGTCAATGCAGCTGTTGCTACCATCAA
GACCAAGCGTACAATCCAATTCGTCGACTGGTGCCCGACTGGGTTCAAGT
GTGGTATCAACTACCAGCCACCAACTGTTGTTCCTGGTGGTGACCTTGCC
AAGGTGCAGAGGGCTGTTTGCATGATCTCCAACTCCACCAGTGTGGCAGA
GGTGTTCTCTCGCATTTGACCACAAGTTTGATCTTATGTATGCAAAGCGT
GCTTTCGTCCACTGGTATGT