DN618330

Overview
NameDN618330
Unique NameDN618330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14
Identity = 51/169 (30.18%), Postives = 81/169 (47.93%), Query Frame = 3
Query:  192 ETSVLQVIG---QARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRH----------------------RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 623
            E SV Q+ G     ++A  F  F  +Y + Y+ + E   ++  F  N   I+  N     Y++ +N+F+D+S ++F+ +                        G  +N   ++ G + L ADV PE  D+RE GIV   KDQG CGSCW F++ G++E  Y +   K I
Sbjct:  218 EVSVAQIEGLFVNLKYASKFFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGAN-LLADV-PEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTI 384          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14
Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  F  ++ K Y S EE   RF  F  NL  I   N   ++++     G+NKFAD S +EF+ + L    N       +    AD L        P   DWR  G V+PVK+QG CGSCW+FSTTG++E  +  +  K +SL
Sbjct:   29 FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYL----NNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSL 165          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  258 RYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            ++ K Y +  E + R   F++N   I   N    +G +SY+LGLNK+AD    EF+    G         +    L            +P++ DWRE G V+ VKDQGHCGSCW FS+TG+LE  + +  G  +SL
Sbjct:   34 QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSL 169          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14
Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH-KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  F   Y + YES EE + R + F  N+  +R+   + L   + + G+ KF+D + EEF+   L          K    K   D+ P   DWR  G V+ VKDQG CGSCW FS TG++E  +    G  +SL
Sbjct:  187 FKNFVITYNRTYESKEEARWRLSVFVNNM--VRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSL 318          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  267 KIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLNKFADWSWEEFQ----RHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            K Y  + E + RF  F  NL  +   N     ++ +GL +FAD + EEF+    R ++   ++   T +  +K   DVLP+  DWR +G V  VKDQG+CGSCW FS  G++E       G+ ISL
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK-EGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISL 177          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.974e-14
Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  F   Y + YES EE + R   F++N+  IR+   + L   + + G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E  +    G  +SL
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNM--IRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSL 296          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.884e-14
Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = 3
Query:  258 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 617
            +Y K Y  VEE +L+ A + +NL +I+  N + GL    + + +N FAD + EEF++         + T     K  +  LP  KDWR+ G V+PV++QG CGSCW F+  G++E    Q F K
Sbjct:   35 KYAKSYSPVEE-ELKRAVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEG---QMFSK 154          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.073e-14
Identity = 51/147 (34.69%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  240 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL------------SYRLGLNKFADWSWEEFQRHRLGAAQNCSA--TTKGNH--KLTADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  F ++Y K Y+  +E + R+  F  NL+ I S N + L            S + G+NKF+D + +E      G   N S   T   N   K   D+ LP+  DWR++  V+P+KDQG CGSCW F   G++E+ Y     K I L
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDL 203          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14
Identity = 52/140 (37.14%), Postives = 69/140 (49.29%), Query Frame = 3
Query:  249 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEF---------QRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 629
            F  ++GK Y + EE   R + F   L  I+  N    KG ++Y L +N F+D + EE          +RH L      + TT     + ADV     DWR  G V+PVKDQG CGSCW FS   +LE A+    G  +SL
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPTTP----MAADV-----DWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSL 153          
BLAST of DN618330 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.653e-14
Identity = 42/125 (33.60%), Postives = 61/125 (48.80%), Query Frame = 3
Query:  237 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY 599
            S+  F  +YG+ Y   +E   R   F +N  LI   N K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE  +
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQH 143          
The following BLAST results are available for this feature:
BLAST of DN618330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CYSP_PLAVS1.022e-1430.18Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CYSP1_DICDI1.022e-1437.32Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SARPE1.022e-1436.03Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATF_HUMAN1.743e-1435.82Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CPR1_ARATH2.277e-1437.30Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATF_MOUSE2.974e-1436.57Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATJ_RAT3.884e-1437.10Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATV_NPVHZ5.073e-1434.69Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CRUST_PANBO6.625e-1437.14Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP3_HOMAM8.653e-1433.60Digestive cysteine proteinase 3 OS=Homarus america... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618330 ID=DN618330; Name=DN618330; organism=Citrus sinensis; type=EST; length=630bp
CGAAGCCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCA
TTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCA
ATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCC
GTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTT
TGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCC
GGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGT
AAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTG
GGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCA
CTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAA
GACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTG
TGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACC
ACCAGGCCTTTGGAAAGGGTATCTCTTTGT
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