DN618329

Overview
NameDN618329
Unique NameDN618329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.338e-24
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = -2
Query:  293 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY   D +CK+  EN          +  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct:  200 ESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.089e-23
Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = -2
Query:  293 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            ++YPY   D  C F+   VG       +I  G E ++  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  YWL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct:  240 KSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 371          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.089e-23
Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  299 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 685
            +AYPY G+D  C +++     +      I +G E  L+ AV  V PVSV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  YW+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  199 DAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLASFP 327          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.168e-23
Identity = 59/135 (43.70%), Postives = 78/135 (57.78%), Query Frame = -2
Query:  293 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 679
            YPY  K+GVC+++ +N   ++   V +   +ED L  AV    P++    V+   FRFY+ GVY   KC +    VNHAV+ VGYG E    DG  YWLIKNSWG+ WG  GY K+   + N C IA+ A YP V
Sbjct:  213 YPYERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSY---VNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASLAQYPTV 343          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.058e-23
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  299 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 685
            +AYPY G+D  C +++     +      I +G E  L+ AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  +W+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  199 DAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFP 327          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.218e-23
Identity = 55/131 (41.98%), Postives = 73/131 (55.73%), Query Frame = -2
Query:  299 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 685
            +AYPY G+D  C +S      +      I    E  L+ AV  + PVSV  +  +  F+FY  GVY  T C   P ++NHAV+AVGYG + G  +W+IKNSWG  WG+ GY  +    K  CGIA  AS+P
Sbjct:  204 DAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCN--PENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQTCGIANLASFP 332          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.503e-22
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = -2
Query:  296 YPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 679
            YPY GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG+++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         CGIA   SYP+
Sbjct:  216 YPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVAN-QPVSVAIEAGGRAFQLYSSGIFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPL 344          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22
Identity = 55/132 (41.67%), Postives = 73/132 (55.30%), Query Frame = -2
Query:  293 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 682
            +YPY   +G C++ S+           +  G+ED L+ AV    PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+GD GY +M     N CGIA+  SYP +
Sbjct:  203 SYPYKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22
Identity = 55/130 (42.31%), Postives = 73/130 (56.15%), Query Frame = -2
Query:  299 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 679
            YPYTG D  CK + ++   ++     +    E EL+ A+  GLV    V+ +     F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  184 YPYTGSDSTCKTNVKSFA-KITGYTKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 309          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22
Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = -2
Query:  293 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY  KDG CK+ +E         V+I    E  L  AV  V P+SVA +      +FY SG+Y    C +   D++H V+ VGYG E    +   YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct:  200 ESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSK--DLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333          
The following BLAST results are available for this feature:
BLAST of DN618329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATL2_HUMAN8.338e-2443.80Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL_DROME1.089e-2343.28Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATK_RAT1.089e-2342.75Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATQ_RAT3.168e-2343.70Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_MOUSE7.058e-2341.22Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_CHICK9.218e-2341.98Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
ORYA_ORYSJ3.503e-2243.28Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CATS_CANFA4.575e-2241.67Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CPP2_ENTHI5.975e-2242.31Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATL1_RAT5.975e-2242.34Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618329 ID=DN618329; Name=DN618329; organism=Citrus sinensis; type=EST; length=686bp
CCCCCTTTTTTTTTTCCTATAACAACTACCTTTGCATTGACAAAATATAT
ATAANCATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGA
TCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGAT
TATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTC
TGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTG
CTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTG
GGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATC
TTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAG
CCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCAT
GGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCA
CTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGG
TCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAA
TGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTG
CAGACACCATCTTTTCCGGTGTAGGGATATGCTTCC
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