DN618329

Overview
NameDN618329
Unique NameDN618329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 56/130 (43.08%), Postives = 72/130 (55.38%), Query Frame = -2
Query:  299 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 679
            YPYTG D  CK ++     ++     +    E EL+ A+  GLV    V+ +     F+ YKSG YS TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  177 YPYTGTDSTCK-TNVKAFAKITGYNKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 302          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 59/137 (43.07%), Postives = 75/137 (54.74%), Query Frame = -2
Query:  293 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY  KDG CK+ +E         V+I    E  L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct:  200 ESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21
Identity = 55/129 (42.64%), Postives = 72/129 (55.81%), Query Frame = -2
Query:  299 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 679
            YPYTG D  C+ S      ++     +    E EL+ A+  GLV  VS+    V  F+ YKSG Y+ T+C N    +NH V AVGYGV DG   W+++NSWG  WG+ GY  M +  N CG+AT   YP
Sbjct:  184 YPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLV-DVSIDASSVQ-FQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVATDPLYP 309          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = -2
Query:  296 EAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 685
            E YPY G+DG+C  S+ N  V  +DS  N+    E  LQ AV   +PVSV  +     F+ Y+SG+++    G+  +  NHA+  VGYG E+   +W++KNSWG+NWG+ GY + E         CGI   ASYPV
Sbjct:   87 ETYPYRGQDGICN-STVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFT----GSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 53/133 (39.85%), Postives = 71/133 (53.38%), Query Frame = -2
Query:  293 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD--GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 682
            +YPY   D  C +  +N        + +  G E+ L+ AV    PVSV  +      F  Y+SGVY    C     ++NH V+ VGYG  DG  YWL+KNSWG ++GD GY +M    KN CGIA+  SYP +
Sbjct:  201 SYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTE---NMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = -2
Query:  296 YPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 679
            YPY G +G C    +N  V  +D   ++    E  L+ AV   +PVSVA +     F+ Y+SG+++  KCG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME         CGIA  ASYPV
Sbjct:  187 YPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSY-QPVSVAIDAGGRAFQHYQSGIFTG-KCGT---NMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 57/134 (42.54%), Postives = 74/134 (55.22%), Query Frame = -2
Query:  293 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 685
            E+YPY   D  C +  E    +    V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E     +W++KNSWG  WG+ GY KM   + N CGIAT ASYP V
Sbjct:   87 ESYPYEATDTSCNYKPEYSAAKDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAASYPTV 217          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 59/137 (43.07%), Postives = 74/137 (54.01%), Query Frame = -2
Query:  293 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 685
            E+YPY   +  CK++ +         V+I    E  L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D   YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct:  200 ESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = -2
Query:  275 EAYPYTGKDGVCKFSSENVGVQVLDS-VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPVVA*SAPE 685
            ++YPY  +DG C  +  N  V  +D   ++    E+ L  AV   +P+SV+ E    GF+FY  GV++  +CG    +++H V  VGYG   DG  YW++KNSWGE WG+ GY +M+ G    +  CGIA  ASYP+   + P+
Sbjct:  214 DSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVAN-QPISVSIEASGYGFQFYSEGVFTG-RCGT---ELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPIKTSANPK 352          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 54/132 (40.91%), Postives = 71/132 (53.79%), Query Frame = -2
Query:  293 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 682
            +YPY   D  C++ S+           +  G ED L+ AV    PVSV  +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  203 SYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 331          
The following BLAST results are available for this feature:
BLAST of DN618329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CPP3_ENTHI1.331e-2143.08Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATL1_MOUSE1.331e-2143.07Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CPP1_ENTHI2.965e-2142.64Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPGP2_ZINOF3.873e-2141.18Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATS_RAT3.873e-2139.85Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CYSP4_BRANA5.058e-2143.28Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CATL1_SHEEP5.058e-2142.54Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATL1_HUMAN6.606e-2143.07Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CYSP_HEMSP1.127e-2038.89Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATS_HUMAN1.127e-2040.91Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618329 ID=DN618329; Name=DN618329; organism=Citrus sinensis; type=EST; length=686bp
CCCCCTTTTTTTTTTCCTATAACAACTACCTTTGCATTGACAAAATATAT
ATAANCATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGA
TCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGAT
TATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTC
TGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTG
CTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTG
GGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATC
TTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAG
CCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCAT
GGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCA
CTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGG
TCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAA
TGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTG
CAGACACCATCTTTTCCGGTGTAGGGATATGCTTCC
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