DN618329

Overview
NameDN618329
Unique NameDN618329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18
Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  290 YPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT-CASYPVVA 679
            YP+ G++  C         V ++      +  E++L+  +  V P+ +A +  D   +Y+ GV SS  C N  +  NHAV+ VGYGVE+GVPYW+ KN+WG++WG++GYF++    N CG+    AS  V+A
Sbjct:  230 YPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYR-GVISS--CENNGL--NHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVLA 356          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18
Identity = 57/137 (41.61%), Postives = 75/137 (54.74%), Query Frame = -2
Query:  293 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW-GENWGDHGYFKMEMGK-NMCGIATCASYPVV 682
            +YPY GK   C+++ +         V+I    E +L  AV  V P+SVA       F+FYK G+Y   +C   P  ++HA++ VGY  E    D   YWL+KNS  G+NWG  GY KM   + N CGIAT ASYP V
Sbjct:  144 SYPYEGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCD--PEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKDRRNNCGIATAASYPTV 277          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = -2
Query:  296 YPYTGKDGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 679
            YPY   +GVC  +   +N  V +    N+    E  L  AV      +V       F+ Y+SGV+  T CG    ++NH VV VGYG E+G  YW++KNS G+ WG+ GY KM       + +CGIA  ASYP+
Sbjct:  230 YPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGT-CGT---NLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPL 359          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = -2
Query:  320 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 679
            YPY G +  C+ +   + V++       L  E +L   +    P++VA + VD    Y+SG+  +T C +  +  NHAV+ VGYG+E+  PYW+ KNSWG NWG++GYF+     N CG+
Sbjct:  212 YPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIID-YRSGI--ATVCNDNGL--NHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = -2
Query:  320 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 679
            YPY   +  C+ ++    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  198 YPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACGM 312          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = -2
Query:  320 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 679
            YPY   +  C+ +S    VQV D     +  E++L+  + LV P+ +A +  D    YK G+     C ++ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  198 YPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVN-YKQGIIKY--CFDSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = -2
Query:  305 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------YWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 679
            Y YTG+DG CKF    V   V +   +TL   DE Q A  LV+  P++VA       + Y SGV     C  + +D  H V+ VG+G     P       YW+IKNSWG+NWG+ GY+K+  G+N+CG+ +  S
Sbjct:  227 YAYTGRDGSCKFDKSKVVASVSNFSVVTL---DEDQIAANLVKNGPLAVAINAA-WMQTYMSGVSCPYVCAKSRLD--HGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVS 354          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = -2
Query:  308 YPYTGKDGVCKFSSENVGVQVLDSVNIT--LGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 679
            +PYT KD  CK     +     D   +    G  +E    + LV+  P++VAFEV D F  Y SG+Y  T   +   P ++ NHAV+ VGYG +   G+ YW+IKNSWG NWG+ GYF++  G + C I + A
Sbjct:  321 FPYTAKDSPCKPRENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIA 453          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = -2
Query:  320 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 679
            YPY   +  C+       V V          E++L+  + L  P+ VA +  D    Y+ G+     C N  +  NHAV+ VGYGVE+ VPYW++KNSWG +WG+ G+FK++   N CGI
Sbjct:  198 YPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN-YEQGIIKY--CANNGL--NHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNACGI 312          
BLAST of DN618329 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18
Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = -2
Query:  320 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 679
            YPY   +G C+ ++    V+V          E++L+  +  V P+ VA +  D    YK G+     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  199 YPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVN-YKRGIMKY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
The following BLAST results are available for this feature:
BLAST of DN618329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATV_NPVLD3.069e-1837.12Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATL6_HUMAN3.069e-1841.61Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CPR4_ARATH4.008e-1838.81Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATV_NPVST4.008e-1837.50Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVRO4.008e-1836.67Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVBM4.008e-1836.67Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CYSP_PEA6.836e-1839.55Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATC_MOUSE6.836e-1839.85Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATV_NPVEP8.929e-1837.50Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_NPVCF8.929e-1837.50Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618329 ID=DN618329; Name=DN618329; organism=Citrus sinensis; type=EST; length=686bp
CCCCCTTTTTTTTTTCCTATAACAACTACCTTTGCATTGACAAAATATAT
ATAANCATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGA
TCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGAT
TATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTC
TGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTG
CTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTG
GGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATC
TTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAG
CCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCAT
GGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCA
CTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGG
TCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAA
TGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTG
CAGACACCATCTTTTCCGGTGTAGGGATATGCTTCC
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