CX046616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROYA (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila yakuba GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.901e-39 Identity = 85/166 (51.20%), Postives = 111/166 (66.87%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 493 PEVLKKKRNEVPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQENVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 658
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROER (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila erecta GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.901e-39 Identity = 85/166 (51.20%), Postives = 111/166 (66.87%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 493 PEVLKKKRGEVPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQENVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 658
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_NEOFI (Eukaryotic translation initiation factor 3 subunit C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=nip1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.789e-39 Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = -1 Query: 4 NSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 447 N ++ L + ++KY D +ARAMLC IY AL D++ +RDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 471 NVENLVLSLCNYLFKYSDGIIRARAMLCQIYFLALHDQYYRSRDLMLMSHLTENISNFDVSTQILFNRTLVQIGLCAFRSGLIYEAQNTLSEVCGSGRQKELLAQGIIMQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 618
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROPS (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.789e-39 Identity = 85/166 (51.20%), Postives = 111/166 (66.87%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 496 PEVLKKKRGELPATTATSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQENVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 661
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROPE (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila persimilis GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.789e-39 Identity = 85/166 (51.20%), Postives = 111/166 (66.87%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 496 PEVLKKKRGEVPATTATSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQENVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 661
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ASPFU (Eukaryotic translation initiation factor 3 subunit C OS=Aspergillus fumigatus GN=nip1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.789e-39 Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = -1 Query: 4 NSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 447 N ++ L + ++KY D +ARAMLC IY AL D++ +RDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 471 NVENLVLSLCNYLFKYSDGIIRARAMLCQIYFLALHDQYYRSRDLMLMSHLTENISNFDVSTQILFNRTLVQIGLCAFRSGLIYEAQNTLSEVCGSGRQKELLAQGIIMQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 618
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ASPFC (Eukaryotic translation initiation factor 3 subunit C OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=nip1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.789e-39 Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = -1 Query: 4 NSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 447 N ++ L + ++KY D +ARAMLC IY AL D++ +RDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 471 NVENLVLSLCNYLFKYSDGIIRARAMLCQIYFLALHDQYYRSRDLMLMSHLTENISNFDVSTQILFNRTLVQIGLCAFRSGLIYEAQNTLSEVCGSGRQKELLAQGIIMQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 618
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ASPCL (Eukaryotic translation initiation factor 3 subunit C OS=Aspergillus clavatus GN=nip1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 8.441e-39 Identity = 77/140 (55.00%), Postives = 102/140 (72.86%), Query Frame = -1 Query: 4 LVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 423 L + +++Y D +ARAMLC IY AL D++ ARDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 480 LCNYLFQYSDGIIRARAMLCQIYFLALHDQYYRARDLMLMSHLTENISNFDVSTQILFNRTLVQIGLCAFRAGLIYEAQNTLSEVCGSGRQKELLAQGIILQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 619
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_COCIM (Eukaryotic translation initiation factor 3 subunit C OS=Coccidioides immitis GN=NIP1 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.102e-38 Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = -1 Query: 4 PENSRTMMDMLVSLI----YKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 453 P + ++ + +LV I ++Y D +ARAMLC IY AL D++ ARDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQE+LER+RQ+P+HMHINLELLE ++L ++ Sbjct: 463 PRDMKSDVSLLVQTICNYLFQYSDGIIRARAMLCQIYFLALHDKYHRARDLMLMSHLTENISNFDVSTQILFNRTLVQIGLCAFRAGLIYEAQNTLSEVCGSGRQKELLAQGIILQRYSSVSPEQEKLERQRQLPFHMHINLELLECIYLTSSM 616
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_XENTR (Eukaryotic translation initiation factor 3 subunit C OS=Xenopus tropicalis GN=eif3c PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.440e-38 Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = -1 Query: 1 ENSRTMMDMLVSLIY-KYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 450 E+S +MD L IY K +R + A+LC IYHHAL + + ARDL+LMSHLQDN+Q D QIL+NR M QLG+CAFR GM + H+ L ++ S G+ KELL QG+ E+ EQE++E+RRQ+P+HMHINLELLE V+L A+L Sbjct: 543 EDSAILMDRLCKYIYAKDRTDRIRTCAILCHIYHHALHNRWFQARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGMIRDAHNALLDIQSSGRAKELLGQGLLMRTMQERNQEQEKIEKRRQIPFHMHINLELLECVYLVSAML 693 The following BLAST results are available for this feature:
BLAST of CX046616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046616 ID=CX046616; Name=CX046616; organism=Citrus sinensis; type=EST; length=510bpback to top |