CX046616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_XENLA (Eukaryotic translation initiation factor 3 subunit C OS=Xenopus laevis GN=eif3c PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.440e-38 Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = -1 Query: 1 ENSRTMMDMLVSLIY-KYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 450 E+S +MD L IY K +R + A+LC IYHHAL + + ARDL+LMSHLQDN+Q D QIL+NR M QLG+CAFR GM + H+ L ++ S G+ KELL QG+ E+ EQE++E+RRQ+P+HMHINLELLE V+L A+L Sbjct: 544 EDSAILMDRLCKYIYAKDRTDRIRTCAILCHIYHHALHNRWFQARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGMIRDAHNALLDIQSSGRAKELLGQGLLMRTMQERNQEQEKIEKRRQIPFHMHINLELLECVYLVSAML 694
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_EMENI (Eukaryotic translation initiation factor 3 subunit C OS=Emericella nidulans GN=nip1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.880e-38 Identity = 77/148 (52.03%), Postives = 106/148 (71.62%), Query Frame = -1 Query: 4 NSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 447 +++T++ L + +++ D +ARAML IY AL D++ ARDL+LMSHL +N+ DV SQILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 470 DAQTLVQTLCNYLFRNSDGILRARAMLAQIYFLALHDQYYRARDLMLMSHLSENIANFDVSSQILFNRTLVQIGLCAFRAGLIYEAQNTLSEICGSGRQKELLAQGIILQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 617
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROVI (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila virilis GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.880e-38 Identity = 84/159 (52.83%), Postives = 109/159 (68.55%), Query Frame = -1 Query: 1 VPRKPTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 474 +P T P +S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 507 LPAAGTAP-SSVEVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPSTRILYNRMMANLGLCAFRQENIKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 664
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROMO (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila mojavensis GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.880e-38 Identity = 84/159 (52.83%), Postives = 109/159 (68.55%), Query Frame = -1 Query: 1 VPRKPTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 474 +P T P +S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 507 LPAAGTAP-SSVEVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPSTRILYNRMMANLGLCAFRQENIKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 664
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROGR (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila grimshawi GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.880e-38 Identity = 81/151 (53.64%), Postives = 106/151 (70.20%), Query Frame = -1 Query: 1 ENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 450 ++S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 525 QSSVEVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPSTRILYNRMMANLGLCAFRQENIKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 675
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ASPOR (Eukaryotic translation initiation factor 3 subunit C OS=Aspergillus oryzae GN=nip1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.456e-38 Identity = 76/144 (52.78%), Postives = 103/144 (71.53%), Query Frame = -1 Query: 4 MMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 435 ++ L + ++ Y D +ARAMLC IY AL D++ +RDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 474 LVQTLCNYLFTYSDGIIRARAMLCQIYFLALHDQYYRSRDLMLMSHLTENISNFDVNTQILFNRTLVQIGLCAFRAGLIYEAQNTLSEVCGSGRQKELLAQGIILQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 617
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DANRE (Eukaryotic translation initiation factor 3 subunit C OS=Danio rerio GN=eif3c PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.208e-38 Identity = 79/151 (52.32%), Postives = 104/151 (68.87%), Query Frame = -1 Query: 1 ENSRTMMDMLVSLIY-KYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 450 ++S +MD L IY K +R + A+LC IYHHAL + ARDL+LMSHLQDN+Q D QIL+NR M QLG+CAFR GM + H+ L ++ S G+ KELL QG+ E+ EQE++E+RRQ+P+HMHINLELLE V+L A+L Sbjct: 541 DDSAIIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEKIEKRRQVPFHMHINLELLECVYLVSAML 691
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ASPTN (Eukaryotic translation initiation factor 3 subunit C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=nip1 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.208e-38 Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = -1 Query: 4 TMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAI 438 +++ L + ++++ D +ARAMLC IY AL D++ +RDL+LMSHL +N+ DV +QILFNR + Q+GLCAFR G+ E + LSE+ G+ KELLAQGI RY +PEQERLER+RQ+P+HMHINLELLE ++L ++ Sbjct: 476 SLVQTLCNYLFRHSDGILRARAMLCQIYFLALHDQYYRSRDLMLMSHLTENIANFDVSTQILFNRTLVQIGLCAFRAGLVYEAQNTLSEVCGSGRQKELLAQGIILQRYSTVSPEQERLERQRQLPFHMHINLELLECIYLTSSM 620
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_MAGGR (Eukaryotic translation initiation factor 3 subunit C OS=Magnaporthe grisea GN=NIP1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.189e-38 Identity = 74/159 (46.54%), Postives = 114/159 (71.70%), Query Frame = -1 Query: 1 LVPRKPTFPENSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 477 + PR+ T + ++++L + ++ + +ARAMLC IY AL D++ +RD++LMSHLQ+ + DVL+QIL+NR + Q+GLCAFR G+ + + L ++ G+ KELLAQG+ R+++ +PEQERLER+RQ+P+HMHINLELLE V+L C++L Sbjct: 469 ITPREQTV--EAAQLVNVLCNYLFANSEGIHRARAMLCQIYFLALHDDYYKSRDMMLMSHLQETISSFDVLTQILYNRTLVQVGLCAFRKGLVYDAQNTLQDICGSGRQKELLAQGVMIQRFNQVSPEQERLERQRQLPFHMHINLELLECVYLTCSML 625
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ANOGA (Eukaryotic translation initiation factor 3 subunit C OS=Anopheles gambiae GN=eIF3-S8 PE=3 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 4.189e-38 Identity = 86/163 (52.76%), Postives = 109/163 (66.87%), Query Frame = -1 Query: 1 LVPRKPTFPENSRTM---MDMLVSLIY-KYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 477 L RK P N+ T MD L IY K +R + RA+L I+HHAL D + ARDL+LMSHLQ+ + D +QIL+NR MA LGLCAFR G + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 515 LKKRKGQLPANTITSVEEMDKLCRYIYAKDQTDRLRTRAILSHIFHHALHDNWFQARDLVLMSHLQETIHHSDPATQILYNRMMANLGLCAFRHGNIKDAHLCLVDLMMTGKPKELLAQGLVPQRQHERSLEQEKIEKQRQMPFHMHINLELLECVYLVSAML 677 The following BLAST results are available for this feature:
BLAST of CX046616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046616 ID=CX046616; Name=CX046616; organism=Citrus sinensis; type=EST; length=510bpback to top |