DN618325

Overview
NameDN618325
Unique NameDN618325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_PYRIL (30S ribosomal protein S7P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps7p PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.738e-36
Identity = 78/145 (53.79%), Postives = 101/145 (69.66%), Query Frame = -3
Query:  132 RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 566
            RF KA+ PIVERL N +M  GRN GKK  A  IVK A +II+  T QNPIQV+VDA+IN  PRE+ TRI   G+    +VD+SP RR++ A+  +T GAR  +F N K I ECLADE+I AA     SYA++K++E+ER+A A+R
Sbjct:   80 RFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDIIYYKTGQNPIQVLVDAIINVAPREEVTRIIMGGIAYTVSVDVSPQRRLDLALRWITEGARTCSFNNPKPIEECLADEIIAAASNDPRSYAVRKREELERIAAASR 224          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 2.270e-36
Identity = 79/146 (54.11%), Postives = 106/146 (72.60%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            +RF KA+ PIVERL N +M  GRN GKK +A  IVK A +II+L T QNPIQV+V A+ NS PRE+ TRI   G+V   AVD+SP RR++ A+  + TGA++++F N K I E LA+E+I AA   S S+AIK+K+EIER+A ++R
Sbjct:   48 RRFGKAKVPIVERLINQIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVTRIMYGGIVYYVAVDVSPQRRIDLALRHIATGAKDASFNNPKPIEEVLAEEIIAAANNDSKSFAIKRKEEIERIALSSR 193          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36
Identity = 75/145 (51.72%), Postives = 101/145 (69.66%), Query Frame = -3
Query:  132 RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 566
            RF KA+ PIVERL N +M  GRN GKK  A  IVK A +I++  T QNPIQV +DA++N+ PRE+ TRI   G+    +VD+SP RR++ A+  +T GAR  +F N K I ECLADEL+ AA     SYA++K++E+ER+A A+R
Sbjct:   80 RFGKARIPIVERLINLMMRPGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPREEITRIIMGGIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADELVAAAANDPKSYAVRKREELERIAAASR 224          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36
Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            +RF KA+ PIVERL N++M  GRN GKK++A  IVK A +II L T QNPIQV+V A+ NS PRE+ TRI   G+V   AVD++P RRV+ A+  L  GA+E++F N K I E LA+E+I AA     S+AI+KK+EIER+A ++R
Sbjct:   49 RRFGKAKLPIVERLINNVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVMGAKEASFNNPKPIEEALAEEIIAAASNDPKSFAIRKKEEIERIALSSR 194          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 74/145 (51.03%), Postives = 101/145 (69.66%), Query Frame = -3
Query:  132 RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 566
            RF KA+ PIVERL N +M  GRN GKK  A  IVK A ++I+  T +NP+QV +DA+IN+ PRE+ TRI   G+    +VD+SP RR++ A+  +T GAR  +F N K I ECLADE+I AA     SYA++K++E+ER+A A+R
Sbjct:   79 RFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREELERIAAASR 223          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_SULAC (30S ribosomal protein S7P OS=Sulfolobus acidocaldarius GN=rps7p PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.537e-35
Identity = 77/146 (52.74%), Postives = 104/146 (71.23%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            +RF K++ PIVERL N+LM  GRN GKK++A  IVK   +II + T QNPIQV+V A+ N+ PRE+ TRI   G+V   AVD++P RRV+ A+  L TGA E++F N K I E LA+E+I AA   + S AI+KK+EIER+A ++R
Sbjct:   50 RRFGKSRIPIVERLINNLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVTGASEASFNNPKPIEEALAEEIIAAANNDNKSVAIRKKEEIERIALSSR 195          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METKA (30S ribosomal protein S7P OS=Methanopyrus kandleri GN=rps7p PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34
Identity = 75/146 (51.37%), Postives = 104/146 (71.23%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            KRF KA+ PIVERL N +M   +N GKK +A  IVK A +IIH  T +NPIQV+V A+ N+ PRE+ T I   G+   +AVD SP RR++ A+ L+T GA++ AFRN K I ECLA+E+I AA+  +  ++I++K+EIER+A+A R
Sbjct:   52 KRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEEIERIAEAAR 197          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_ARCFU (30S ribosomal protein S7P OS=Archaeoglobus fulgidus GN=rps7p PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.733e-34
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = -3
Query:  132 FRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 563
            F K +  IVERL N +M  G N GKK++A  IVK A EII   T +NPIQV+VDA+IN+GPRE+  R+   G+   +AVD S  RRV+ A+  +  GAR +AF++ ++IA+CLADE+I AA   S S+A+ KK+E+ERVAK+ R
Sbjct:   51 FAKQKVFIVERLINKVMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPREEVVRLKYGGIAVPKAVDTSSSRRVDIALRNIAEGARRAAFKSKRSIAQCLADEIIAAANNESRSFAVAKKEEVERVAKSAR 194          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_DESMO (30S ribosomal protein S7P OS=Desulfurococcus mobilis GN=rps7p PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.377e-33
Identity = 74/146 (50.68%), Postives = 100/146 (68.49%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            +RF K   PIVERL N +M  GRN GKK +A  IVK A +IIH+ T +NPIQV+V A+ N+ PRE+ TRI   G+    +VD++PLRR++ A+  LT GAR  AF +   I E LA+E++ AA     SYAI+KK+EIER+A ++R
Sbjct:   53 RRFGKTHVPIVERLINKVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPREETTRIMYGGITYHVSVDVAPLRRIDLALRHLTEGARMKAFHSPIPIEEALAEEIVLAASNDPKSYAIQKKEEIERIALSSR 198          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.377e-33
Identity = 75/146 (51.37%), Postives = 102/146 (69.86%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            KRF KA  PIVERL N++M  GRN GKK +A  IVK + E+I+L T +NP+QV+V A+ N+ PRE+ TRI   G+    +VDI+PLRR++ A+  LT GAR  AF N  +I E LA+E+  AA     SYA++KK+EIER+A ++R
Sbjct:   53 KRFGKALVPIVERLINNVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITYHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKEEIERIALSSR 198          
The following BLAST results are available for this feature:
BLAST of DN618325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
RS7_PYRIL1.738e-3653.7930S ribosomal protein S7P OS=Pyrobaculum islandicu... [more]
RS7_SULSO2.270e-3654.1130S ribosomal protein S7P OS=Sulfolobus solfataric... [more]
RS7_THENV6.605e-3651.7230S ribosomal protein S7P OS=Thermoproteus neutrop... [more]
RS7_SULTO6.605e-3654.1130S ribosomal protein S7P OS=Sulfolobus tokodaii G... [more]
RS7_PYRAE2.510e-3551.0330S ribosomal protein S7P OS=Pyrobaculum aerophilu... [more]
RS7_SULAC9.537e-3552.7430S ribosomal protein S7P OS=Sulfolobus acidocalda... [more]
RS7_METKA3.624e-3451.3730S ribosomal protein S7P OS=Methanopyrus kandleri... [more]
RS7_ARCFU4.733e-3451.3930S ribosomal protein S7P OS=Archaeoglobus fulgidu... [more]
RS7_DESMO1.377e-3350.6830S ribosomal protein S7P OS=Desulfurococcus mobil... [more]
RS7_DESK11.377e-3351.3730S ribosomal protein S7P OS=Desulfurococcus kamch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618325 ID=DN618325; Name=DN618325; organism=Citrus sinensis; type=EST; length=571bp
TTTTTTTTTTTTTAATCCGCAAAAATATCGACAAAACATTGTCCAAAGTT
TGAGAAAAAAATAATAAAAAACAAAACATTGTCCAAAGTTTGAGAAAAAA
TAATAAAAAACAAAACATTGTCCAAAGTTCAGCGATTGGCCTTAGCAACT
CGCTCGATCTCGTCCTTCTTCTTGATGGCATAGCTGTTAGATGAACCCTT
GGCAGCATTAATGAGTTCATCGGCCAAACATTCCGCAATAGTCTTGATAT
TACGGAAAGCAGATTCACGAGCACCAGTGGTCAGCAAATAGATTGCTTGA
TTCACACGGCGCAATGGGGAAATATCAACCGCCTGACGCCTAACAACACC
AGCAGATCCAATGCGGGTAGCGTCTTCCCTTGGACCACTGTTGATGACAG
CATCAACAATGACCTGAATTGGGTTCTGGTCAGTCAAAAGGTGAATGATT
TCCATGGCGTGCTTGACAATCCTGACGGCCATCAATTTCTTGCCATTGTT
TCTTCCATGCATCATCAGTGAGTTTGTGAGCCTCTCAACAATTGGGCACT
GTGCCTTCCTAAACCGCTTCA
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