DN618325

Overview
NameDN618325
Unique NameDN618325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METJA (30S ribosomal protein S7P OS=Methanocaldococcus jannaschii GN=rps7p PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.166e-32
Identity = 75/147 (51.02%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 569
            ++F KA+  IVERL N +M    N GKKL A++IV++A EII   T QNPIQV+VDA+ N+GPRED TRI   G+V  Q+VD S LRR++ A+  +  GA  +A ++ K I E LA+E+I AA+G    SYA++KK+E ERVA++ R
Sbjct:   45 RQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALAEEIIAAARGDMQKSYAVRKKEETERVAQSAR 191          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METMP (30S ribosomal protein S7P OS=Methanococcus maripaludis GN=rps7p PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 75/147 (51.02%), Postives = 101/147 (68.71%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 569
            K F K++  IVERL N LM +  N GKK   + IV+ A+ II   T +NP+QV+VDA+ NSGPRE+ TRI   G+   Q+VD+SP RR++ A   +  GA ESA +N KT+A+CLADELI A+K     S+A+KKK+E ERVA++ R
Sbjct:   42 KSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASESAHKNKKTVAQCLADELIFASKADMQKSFAVKKKEEKERVAQSAR 188          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32
Identity = 69/146 (47.26%), Postives = 98/146 (67.12%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            ++F KA  PI+ER+ N LM  GRN GKK  A +I+K A +II++ T +NP+QV VDAV+N  PRE+ TR+   G+    +VD+ P RR++ AI  +  GAR  +F N + I ECLA+E+I AA     SYA++++DE+ERVA   R
Sbjct:   79 RKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYPVSVDVGPTRRLDLAIRWIAEGARACSFNNPRPIEECLANEIIAAANNDPASYALRRRDEMERVAATAR 224          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METM5 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps7p PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.557e-32
Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 569
            K F KA+  IVERL N LM +  N GKK   + IV+ A+ II   T +NP+QV+VDA+ NSGPRE+ TRI   G+   Q+VD+SP RR++ A   +  GA +SA +N KT+A+CLADE+I A+K     S+A++KK+E ERVA++ R
Sbjct:   42 KSFDKAKMNIVERLANKLMANQNNTGKKHETLAIVEEALAIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASDSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.870e-32
Identity = 71/144 (49.31%), Postives = 104/144 (72.22%), Query Frame = -3
Query:  138 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 569
            ++F K++  IVERL N +M   RN+GKK  A  IV+ A+EII+  T QNP+QV+V AV N+ PRE+ TRI   G+  + AVDI+P RRV+ ++  +T GA +SAF+N K+ A+CLADE++ A+   S S+A++KK+E ERVA++
Sbjct:   42 RQFAKSKVSIVERLMNKIMRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQIAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLASDEDSRSFAVQKKEEKERVARS 185          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METM7 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps7p PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31
Identity = 72/147 (48.98%), Postives = 101/147 (68.71%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 569
            K F K++  IVERL N LM +  N GKK   + IV+ A+ II   T +NP+QV+VDA+ NSGPRE+ TRI   G+   Q+VD+SP RR++ A   +  GA +SA +N KT+A+CLADE+I A+K     S+A++KK+E ERVA++ R
Sbjct:   42 KSFDKSKMNIVERLANKLMANQENTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METM6 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps7p PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31
Identity = 72/147 (48.98%), Postives = 101/147 (68.71%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 569
            K F K++  IVERL N LM +  N GKK   + IV+ A+ II   T +NP+QV+VDA+ NSGPRE+ TRI   G+   Q+VD+SP RR++ A   +  GA +SA +N KT+A+CLADE+I A+K     S+A++KK+E ERVA++ R
Sbjct:   42 KSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.199e-31
Identity = 69/144 (47.92%), Postives = 105/144 (72.92%), Query Frame = -3
Query:  138 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 569
            ++F K++  IVERL N +M   RN+GKK  A +IV+ A EII+  T +NP+Q++V AV N+ PRE+ TRI   G+  + AVDISP RRV+ ++  +T GA ++AF+N K+I ECLA+E++ AA+  + S+AI+KK+E ER+A++
Sbjct:   41 RQFAKSKVSIVERLINKVMRTERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVAVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKERIARS 184          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.397e-31
Identity = 67/146 (45.89%), Postives = 100/146 (68.49%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            ++F K++  IVERL N+LM    N GKK + +R V+ A +II+  T QNPIQ++VDA+ N+GPRE+  R+   G+   +AVD +P RRV+ A+  ++ G   +AF++ +++AECLA ELI AA   + S++I +KD  ERVAKA R
Sbjct:   44 QQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189          
BLAST of DN618325 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.355e-31
Identity = 65/146 (44.52%), Postives = 101/146 (69.18%), Query Frame = -3
Query:  132 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 569
            ++F+K++  +VERL N +M   +N G+K +A RIV+ A +IIH  T +NP+ V+V A+ N+GPRE+  R+   G+   +AVD +P RRV+ A+ L+  GA +++F++ ++I  CLADE+I AA     S+A+ +KD IERVAKA R
Sbjct:   40 QQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDSIERVAKAAR 185          
The following BLAST results are available for this feature:
BLAST of DN618325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
RS7_METJA1.166e-3251.0230S ribosomal protein S7P OS=Methanocaldococcus ja... [more]
RS7_METMP1.989e-3251.0230S ribosomal protein S7P OS=Methanococcus maripal... [more]
RS7_CALMQ2.597e-3247.2630S ribosomal protein S7P OS=Caldivirga maquilinge... [more]
RS7_METM57.557e-3249.6630S ribosomal protein S7P OS=Methanococcus maripal... [more]
RS7_METST9.870e-3249.3130S ribosomal protein S7P OS=Methanosphaera stadtm... [more]
RS7_METM71.683e-3148.9830S ribosomal protein S7P OS=Methanococcus maripal... [more]
RS7_METM61.683e-3148.9830S ribosomal protein S7P OS=Methanococcus maripal... [more]
RS7_METTH2.199e-3147.9230S ribosomal protein S7P OS=Methanobacterium ther... [more]
RS7_METMA6.397e-3145.8930S ribosomal protein S7P OS=Methanosarcina mazei ... [more]
RS7_METTP8.355e-3144.5230S ribosomal protein S7P OS=Methanosaeta thermoph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02G15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002G15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618325 ID=DN618325; Name=DN618325; organism=Citrus sinensis; type=EST; length=571bp
TTTTTTTTTTTTTAATCCGCAAAAATATCGACAAAACATTGTCCAAAGTT
TGAGAAAAAAATAATAAAAAACAAAACATTGTCCAAAGTTTGAGAAAAAA
TAATAAAAAACAAAACATTGTCCAAAGTTCAGCGATTGGCCTTAGCAACT
CGCTCGATCTCGTCCTTCTTCTTGATGGCATAGCTGTTAGATGAACCCTT
GGCAGCATTAATGAGTTCATCGGCCAAACATTCCGCAATAGTCTTGATAT
TACGGAAAGCAGATTCACGAGCACCAGTGGTCAGCAAATAGATTGCTTGA
TTCACACGGCGCAATGGGGAAATATCAACCGCCTGACGCCTAACAACACC
AGCAGATCCAATGCGGGTAGCGTCTTCCCTTGGACCACTGTTGATGACAG
CATCAACAATGACCTGAATTGGGTTCTGGTCAGTCAAAAGGTGAATGATT
TCCATGGCGTGCTTGACAATCCTGACGGCCATCAATTTCTTGCCATTGTT
TCTTCCATGCATCATCAGTGAGTTTGTGAGCCTCTCAACAATTGGGCACT
GTGCCTTCCTAAACCGCTTCA
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