CX046593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_BACSU (Geranyltranstransferase OS=Bacillus subtilis GN=ispA PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = -3 Query: 141 ELAKYIGADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALLEXXXXXXXXXXXGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAAPLIALANYIAYRQN 602 EL G +G+V GQV D+ +E R+ + +E LE IHE KTA LL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G D DK TYP LL +E +K D K+A++ + +K L L + IA R + Sbjct: 145 ELISAAGTEGMVGGQVADMEAENRQ-VTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_ECOLI (Geranyltranstransferase OS=Escherichia coli (strain K12) GN=ispA PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18 Identity = 60/155 (38.71%), Postives = 83/155 (53.55%), Query Frame = -3 Query: 147 ELAKYIGADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALLEXXXXXXXXXXXGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEK--AAPLIALANYIAYR 602 ELA G G+ GQ +D+++EG K + ++ LE IH HKT AL+ + L +A IGL FQV DDILD+ + LGK G D K TYP LLG+E+++K A L DA+Q L + ++ + L ALA+YI R Sbjct: 144 ELASASGIAGMCGGQALDLDAEG-KHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_HAEIN (Geranyltranstransferase OS=Haemophilus influenzae GN=ispA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.128e-18 Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = -3 Query: 141 LAKYIGADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALL-EXXXXXXXXXXXGTDNEVEK-LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAAPLIALANYIAYRQN 599 LA+ G G+ GQ +D+ SE K + + LE IH +KT ALL TD +E+ L +A IGL FQV DDILD+ S E+GK G DL DK TYPKLLG+ +K+ A L + A +L + + + ALA +I R++ Sbjct: 144 LAQGAGVQGMCLGQSLDLISE-HKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKIPFD--TTVRALAEFIITRKS 295
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_MICLU (Geranyltranstransferase OS=Micrococcus luteus GN=fps PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 147 GADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALLEXXXXXXXXXXXGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLA-DKLNK--DAQQQLSEFDQEKAAPLIALANYIAYR 584 G++G+V GQ++D+ E K L + LE IH HKT L+ D ++E+L + +GL+FQ+ DDILD+ S + +GKT G DL DK TY LLG+E SK+L DKL + DA + L + L L YI R Sbjct: 146 GSNGMVYGQMLDMQGE-HKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETYDALKTLQPINDN----LKTLITYIVER 289
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_BACST (Geranyltranstransferase OS=Bacillus stearothermophilus PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17 Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = -3 Query: 141 LAKYIGADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALLEXXXXXXXXXXXGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAAPLIALANYIAYRQN 599 LAK G +G+VAGQ D+ EG K L + LE+IH HKT +L+ + +L FA +GL FQ+ DDILD+ + +++GK G D +K TYP LL + +K+ + AQ+ L D + AA L + +A R + Sbjct: 147 LAKAAGPEGMVAGQAADMEGEG-KTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFHIEAAQRHLRNADVDGAA-LAYICELVAARDH 297
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_BRAJA (Probable geranyltranstransferase OS=Bradyrhizobium japonicum GN=fppS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.776e-13 Identity = 49/158 (31.01%), Postives = 82/158 (51.90%), Query Frame = -3 Query: 147 ELAKYIGADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALLEXXXXXXXXXXXGTDNEVEKLRT----FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFD--QEKAAPLIALANYIAYR 602 ELA+ + A+G GQ +D++ G K + ++ + +H K+ AL+ G + L ++ C GL QV+DDILD+T + LGKT GKD A K T ++G++E+++ A L +DA + ++ E+ A LI AN ++ Sbjct: 171 ELAQAVSAEGAAGGQAIDLSLVG-KHVELDRIVAMHRMKSGALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQKPTCASIMGLQEARQFALDLLRDAGEAIAPLGPRAERLAQLIQRANAYLFK 327
BLAST of CX046593 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAI (Geranyltranstransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.317e-11 Identity = 46/142 (32.39%), Postives = 76/142 (53.52%), Query Frame = -3 Query: 180 ELAKYIGADGLVAGQVVDINSEGRKDLGIEHLEFIHEHKTAALLEXXXXXXXXXXXGTDNEVEK-LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAAP 602 EL+ IG+ G+ GQ +D+ +E +KD+ + LE I+ +KT+ L+ + L F+ IGL FQ+ DDILD K S KT K ++ K TYP ++G++ES+K +L+K + L+ ++ + P Sbjct: 144 ELSYSIGSSGMCMGQNLDLEAE-KKDVNLSELEIINLYKTSFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSV---KTDNKKII-KKHTYPLIIGLDESRKKIKQLHKKSFLALNSLKKKISIP 280 The following BLAST results are available for this feature:
BLAST of CX046593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046593 ID=CX046593; Name=CX046593; organism=Citrus sinensis; type=EST; length=604bpback to top |