CX046578

Overview
NameCX046578
Unique NameCX046578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.095e-19
Identity = 59/178 (33.15%), Postives = 97/178 (54.49%), Query Frame = -2
Query:    2 NALIVVDVSIIGVYGMGGIGKTTLVQEVARQAMADKL-FDTVVFSEVSQTPDIKKIQQEIAEKLGLEL--HEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAG--DYVENRELKPIATRVAK 520
            N+L+  +   +G+YGMGG+GKTTL+  +  + +     FD V++  VS+    + IQ++I  +LGL     +  E  +AS +C  L N KK +++LD++W  +DL  IG+P      G K++FTTR  DV    E +    +  L   EAW LF+   G      + ++  +A +VA+
Sbjct:  237 NSLMKDERRTLGLYGMGGVGKTTLLASINNKFLEGMNGFDLVIWVVVSKDLQNEGIQEQILGRLGLHRGWKQVTEKEKASYICNIL-NVKKFVLLLDDLWSEVDLEKIGVPPLTRENGSKIVFTTRSKDVCRDMEVDGEMKVDCLPPDEAWELFQKKVGPIPLQSHEDIPTLARKVAE 413          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: RPS2_ARATH (Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.313e-18
Identity = 49/162 (30.25%), Postives = 88/162 (54.32%), Query Frame = -2
Query:   17 IIGVYGMGGIGKTTLVQEVARQAMAD-KLFDTVVFSEVSQTPDIKKIQQEIAEKLGLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLF--KIMAGDYVENRELKPIA 493
            IIGVYG GG+GKTTL+Q +  + +     +D +++ ++S+      IQQ +  +LGL   E+      +    R   +K+ L++LD++W+ +DL   G+P       CK++FTTR + +     +E    +  L ++ AW LF  K+   D +E+  ++ +A
Sbjct:  177 IIGVYGPGGVGKTTLMQSINNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEEIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEYKLRVEFLEKKHAWELFCSKVWRKDLLESSSIRRLA 338          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 81/282 (28.72%), Postives = 133/282 (47.16%), Query Frame = -2
Query:    2 VEKWLVNANESIEQAAKFIQDEEKANDGR-CLMGLFPDWFAR-YHHGKKAETEKEALFKLREEAGR-FDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQAMADKL-FDTVVFSEVSQTPDIKKIQQEIAEKL---GLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYV--ENRELKPIATRVAK 820
            ++ WL N  E+IE     + +   A   R CL G         Y +GK    +   + KL         D+ S   V E     +  G E        L    N L+   V I+G+YGMGG+GKTTL+ ++  +       FD+V++  VS+  +++ I  EIA+K+   G +   + + ++   L   L+  + +L  LD+IW+ ++L  IG+PF      CK++FTTR LDV      EK   +  L + +A+ LF+   G      + E++ ++  VAK
Sbjct:   69 IKVWL-NRVETIESRVNDLLNARNAELQRLCLCGFCSKSLTTSYRYGKSVFLKLREVEKLERRVFEVISDQASTSEVEEQQLQPTIVGQETM------LDNAWNHLMEDGVGIMGLYGMGGVGKTTLLTQINNKFSKYMCGFDSVIWVVVSKEVNVENILDEIAQKVHISGEKWDTKYKYQKGVYLYNFLRKMRFVL-FLDDIWEKVNLVEIGVPFPTIKNKCKVVFTTRSLDVCTSMGVEKPMEVQCLADNDAYDLFQKKVGQITLGSDPEIRELSRVVAK 342          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL22_ARATH (Putative disease resistance protein At3g15700 OS=Arabidopsis thaliana GN=At3g15700 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.037e-16
Identity = 72/283 (25.44%), Postives = 136/283 (48.06%), Query Frame = -2
Query:    2 ENVEKWLVNANESIEQAAKFIQD--EEKANDGRCLMGLFPDWFARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVD-VSIIGVYGMGGIGKTTLVQEVARQAMADKL--FDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGDYVENRELKPIATRVAK 826
            E V+ WL  A+ +I++A + +       +++G  +M         +H   K   +K    +  +  G FD  +    +     + S+   +     L  +  +    + VD   IIG+YG+ G+GKTT++ +V  + +  KL  FD V++  VS+  +++KIQ  I EK+G        + E  +A ++ E L ++++  + LD++W+ +DL   G+P        K++FTT   +V     ++    +  L  + AW LFK+ AG+ +      P  T+VA+
Sbjct:   56 EKVQVWLRQADVAIKEAEEMLITLMSSSSSNGSSMMS--------FHKLDKKLCKKLKEVQEIKSRGTFDVVVENSGIGSGSMMISNVDRDDQTVGLEAVSGLVWRCMTVDNTGIIGLYGVEGVGKTTVLTQVNNRLLQHKLNGFDFVIWVFVSKNVNLEKIQDTIREKIGFLDRSWMSKTEEEKAGKIFEIL-SKRRFALFLDDVWEKVDLVKAGVPPPDGLNRSKIVFTTCSDEVCQEMGAQTKIKMEKLPWERAWDLFKMNAGEEIVKSH--PDITKVAQ 327          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15
Identity = 68/264 (25.76%), Postives = 130/264 (49.24%), Query Frame = -2
Query:   68 VEKWLVNANESIEQAAKFIQDEEKANDG--------RCLMGLFPDWFARYHHGKKAETEKEALFKLREEAGRFDDRISYRTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQAM-ADKLFDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEK-KILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLF 820
            V  WL    E IE+  K + D   A D         R  +     WF+  + G+K   +   L +++  +G+    ++ +  P  + ++  +     ++   TL+    +L   +  ++G++GMGG+GKTTL+  +  + +     +D V++ E S+  D+ KIQ  I E+L +           ++AS +   L++ K + +++LD++W+ + L  IGIP  V  +  K++FTTR  DV     + ++  +  L+E +AW LF
Sbjct:   68 VATWLSQV-EIIEENTKQLMDVASARDASSQNASAVRRRLSTSGCWFSTCNLGEKVFKK---LTEVKSLSGKDFQEVTEQPPPPVVEVRLCQQTVGLDT---TLEKTWESLRKDENRMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVIWVESSKDADVGKIQDAIGERLHICDNNWSTYSRGKKASEISRVLRDMKPRFVLLLDDLWEDVSLTAIGIP--VLGKKYKVVFTTRSKDVCSVMRANEDIEVQCLSENDAWDLF 322          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL6_ARATH (Probable disease resistance protein At1g52660 OS=Arabidopsis thaliana GN=At1g52660 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.779e-14
Identity = 48/164 (29.27%), Postives = 89/164 (54.27%), Query Frame = -2
Query:   50 IQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQAMADKL--FDTVVFSEVSQTPDIKKIQQEIAEKLGL---ELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEKNFSIGILNEQEAWRLFKIMAGD 526
            +   L + +  IIG+YG+ G+GKTT++ +V  + +  K   FD V++  VS+  +++KIQ  I EK+G        + E  +A+++ E L ++++  + LD++W+ +DL   G+P        K++FTT   +V     ++    +  L  + AW LFK   G+
Sbjct:  151 VWRCLTMENTGIIGLYGVEGVGKTTVLTQVNNRLLQQKANGFDFVLWVFVSKNLNLQKIQDTIREKIGFLDRTWTSKSEEEKAAKIFEIL-SKRRFALFLDDVWEKVDLVKAGVPPPDAQNRSKIVFTTCSEEVCKEMSAQTKIKVEKLAWERAWDLFKKNVGE 313          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL9_ARATH (Probable disease resistance protein At1g58602 OS=Arabidopsis thaliana GN=At1g58602 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.178e-13
Identity = 60/198 (30.30%), Postives = 95/198 (47.98%), Query Frame = -2
Query:   56 RTVPEDIWLKSHKGYEAFESRLSTLKAIQNALIVVDVSIIGVYGMGGIGKTTLVQEVARQAMADKLFDTVVFSEVSQTPDIKKIQQEI-------------AEKLGLELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESEK-NFSIGILNEQEAWRLFKIMA 607
            RT P+D    +  G+ A E  +   K +   +   +  ++ + GMGG+GKTTL ++V    M  K FD + +  VSQ   +K + Q I              EK  LE+ E    R   +L E  K+    L++LD+IWK  D   I  P     +G KLL T+R+  ++  T ++  NF    L   ++W+LF+ +A
Sbjct:  152 RTFPKD----NESGFVALEENVK--KLVGYFVEEDNYQVVSITGMGGLGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQNILGDLKPKEEETKEEEKKILEMTEYTLQRELYQLLEMSKS----LIVLDDIWKKEDWEVIK-PIFPPTKGWKLLLTSRNESIVAPTNTKYFNFKPECLKTDDSWKLFQRIA 338          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: DRL8_ARATH (Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 52/164 (31.71%), Postives = 78/164 (47.56%), Query Frame = -2
Query:   26 DVSIIGVYGMGGIGKTTLVQEVARQAMADKLFDTVVFSEVSQTPDIKKIQQEIAEKL-GLELHEEVESRRASRLCE---RLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLR-TESEKNFSIGILNEQEAWRLFKIMAGDYVENRELK 502
            D+ I+ V GMGG+GKTTL ++V         FD + +  VSQ    K + Q I + L   E  +E+     + L +   +L    K L++ D+IWK  D G I  P     +G K+L T+R   + +       NF    L   E+W LF+ +A   V+  E K
Sbjct:  183 DIQIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMILQNLTSRETKDEILQMEEAELHDELFQLLETSKSLIVFDDIWKEEDWGLIN-PIFPPKKGWKVLITSRTETIAMHGNRRYVNFKPECLTILESWILFQRIAMPRVDESEFK 345          
BLAST of CX046578 vs. ExPASy Swiss-Prot
Match: RPP8_ARATH (Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.670e-11
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = -2
Query:   71 TLKAIQNALIVVDV-SIIGVYGMGGIGKTTLVQEVARQAMADKLFDTVVFSEVSQTPDIKKIQQEIAEKLG------LELHEEVESRRASRLCERLKNEKKILVILDNIWKPLDLGTIGIPFGVEHRGCKLLFTTRDLDVLLRTESE-KNFSIGILNEQEAWRL 538
            ++K +   L+  DV  ++ + GMGGIGKTTL ++V    +  + FD   +  VSQ    K + Q I ++L       L++ E    R+  +L E      + LV+LD++WK  D   I   F    RG K+L T+R+  V +  +     F   ILN +E+W+L
Sbjct:  171 SVKELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRILQELQPHDGDILQMDEYALQRKLFQLLE----AGRYLVVLDDVWKKEDWDVIKAVF-PRKRGWKMLLTSRNEGVGIHADPTCLTFRASILNPEESWKL 329          
The following BLAST results are available for this feature:
BLAST of CX046578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
DRL3_ARATH5.095e-1933.15Probable disease resistance protein At1g15890 OS=A... [more]
RPS2_ARATH4.313e-1830.25Disease resistance protein RPS2 OS=Arabidopsis tha... [more]
DRL19_ARATH1.255e-1728.72Putative disease resistance protein At1g63350 OS=A... [more]
DRL22_ARATH4.037e-1625.44Putative disease resistance protein At3g15700 OS=A... [more]
DRL37_ARATH4.464e-1525.76Probable disease resistance protein At5g47250 OS=A... [more]
DRL6_ARATH3.779e-1429.27Probable disease resistance protein At1g52660 OS=A... [more]
DRL9_ARATH4.178e-1330.30Probable disease resistance protein At1g58602 OS=A... [more]
DRL8_ARATH3.910e-1131.71Putative disease resistance protein At1g58400 OS=A... [more]
RPP8_ARATH6.670e-1131.71Disease resistance protein RPP8 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_8H07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8H07-O14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046578 ID=CX046578; Name=CX046578; organism=Citrus sinensis; type=EST; length=836bp
CCTTGGCTACCCTTGTTGCTATAGGTTTTAACTCACGGTTTTCAACATAA
TCACCAGCCATTATCTTGAACAATCTCCAGGCTTCTTGTTCATTTAAAAT
GCCAATCGAGAAGTTTTTTTCAGATTCTGTCCTTAACAGCACATCAAGAT
CTCTTGTTGTGAATAATAATTTGCATCCTCTGTGCTCAACTCCAAAAGGA
ATTCCAATAGTCCCCAAATCAAGAGGTTTCCAGATGTTATCCAGAATCAC
AAGGATCTTTTTCTCATTTTTCAATCGCTCACATAGCCTACTTGCTCTTC
TAGATTCAACTTCCTCGTGCAACTCCAGGCCCAACTTCTCGGCAATTTCC
TGTTGAATCTTTTTTATGTCTGGAGTTTGCGAAACCTCTGAAAAGACCAC
CGTATCAAAGAGCTTGTCTGCCATAGCTTGCCTGGCGACCTCCTGCACCA
GTGTCGTCTTTCCAATGCCGCCCATGCCGTAGACCCCAATGATGCTGACA
TCAACAACGATCAATGCATTTTGTATGGCTTTCAAAGTAGAAAGTCTTGA
TTCGAAGGCCTCGTAGCCTTTGTGAGACTTGAGCCATATATCCTCCGGAA
CGGTACGGTAGGAAATTCTATCATCAAATCTCCCAGCTTCTTCTCGGAGT
TTAAAAAGGGCCTCCTTCTCTGTTTCTGCTTTCTTTCCATGATGATAGCG
AGCAAACCAATCAGGAAACAGCCCCATGAGACATCGGCCATCATTTGCTT
TCTCTTCGTCTTGAATGAATTTGGCTGCCTGCTCAATGCTCTCGTTCGCA
TTAACCAGCCATTTCTCAACATTCTCTTCAATCTTT
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