CX046522

Overview
NameCX046522
Unique NameCX046522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 9.588e-61
Identity = 120/194 (61.86%), Postives = 136/194 (70.10%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWK 796
            MGAY ++ +LWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWR 193          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 9.588e-61
Identity = 120/194 (61.86%), Postives = 135/194 (69.59%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWK 796
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  S+ R  +PTRPDKARRLGYKAKQ                    G  YGKP + GV Q+KF RS +S AEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWR 193          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 233.032 bits (593), Expect = 1.635e-60
Identity = 118/194 (60.82%), Postives = 138/194 (71.13%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWK 796
            MGAY +V EL+RKKQSDVMR+L R+R W+YRQ     R  RP+RPDKARRLGYKAKQ                    G  YGKP + GV QLK  R  +SVAEER GR+LGGLRVLNSYW+ +D+ +KYFEVI+VDPAHNAIR DP +NW+CN VHKHRELRGLTSAGK  RGL GKG+ + +    SRRA W+
Sbjct:    1 MGAYRYVQELYRKKQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL-GKGYRYSQTIGGSRRACWR 193          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.643e-60
Identity = 119/194 (61.34%), Postives = 135/194 (69.59%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWK 796
            MGAY ++ EL++KKQSD +RFL RVRCWEYR  P   R + PTR DKARRLGYKA Q                    G   GKP   GV +LK  R+ RSVAEER GR+   LRVLNSYW+N+DSTYKY+EVILVD +HNAIRNDPR NW+C PVHKHRELRGLTSAG K RGLR KG H   K RPSR+A +K
Sbjct:    1 MGAYKYLQELYKKKQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYK 194          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 231.876 bits (590), Expect = 3.643e-60
Identity = 114/194 (58.76%), Postives = 140/194 (72.16%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWK 796
            MGAY +V EL+RKKQSDV+R+L RVRCW+YRQ   + R  RP+RPDKARRLGYKAKQ                    G  YGKP + GV QLK  R+ +SVAEER GR++GGLRVLNSYW+ +D+ +KY+EVI VDP HNA+R DP++NW+CN VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA W+
Sbjct:    1 MGAYRYVQELYRKKQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV-GKGYRYSQTIGGSRRAAWR 193          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.974e-59
Identity = 115/194 (59.28%), Postives = 138/194 (71.13%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWK 796
            MGAY ++ EL+RKKQSDVMR+L R+R W+YRQ   + R  RPTRPDKARRLGY+AKQ                    G  YGKP + GV QLK  R  +S+AEER GR+LGGLRVLNSYWI +D++YKYFEVIL+D  H+AIR DP+INW+C  VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA WK
Sbjct:    1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI-GKGYRYSQTIGGSRRAAWK 193          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.974e-59
Identity = 116/192 (60.42%), Postives = 134/192 (69.79%), Query Frame = -2
Query:  221 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATW 796
            MGAY ++ EL +KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH ++ +   + ATW
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRYNNS--PQHATW 189          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.999e-58
Identity = 116/192 (60.42%), Postives = 133/192 (69.27%), Query Frame = -2
Query:  221 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATW 796
            MGAY ++ EL +KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH  + +   + ATW
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRFNNS--PQHATW 189          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.751e-54
Identity = 107/194 (55.15%), Postives = 131/194 (67.53%), Query Frame = -2
Query:  218 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA-TWK 796
            MGAY ++ E+WRKKQSD +R+L R+R W YRQ  ++ RV RPTRP+KARRLGY+AKQ                    G  YGKP   GV +LK  +SK++VAE RAGR+LG LRVLNSYW+ EDSTYK++EV+L+DP H AIR +P   W+  PVHKHRE RGLTSAG+K RGL GKG      R   +A  WK
Sbjct:    1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGL-GKGWRFSATRGGSQAKNWK 193          
BLAST of CX046522 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.287e-54
Identity = 106/192 (55.21%), Postives = 127/192 (66.15%), Query Frame = -2
Query:  221 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATW 796
            MGAY ++ E++RKKQSDVMRFL R+R W+YR    + R  RPTRP+KARRLGYKAKQ                    G  YGKP + GV QLK  R+ +S+AEER GR+LGGLRVLNSYW+ +DSTYKYFEVILVD  HN IR    +NW+C    KHRE+RG TSAG+K+RGL    H       SRR+ W
Sbjct:    1 MGAYKYMQEIYRKKQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGLGRGFHYSQTKGGSRRSCW 192          
The following BLAST results are available for this feature:
BLAST of CX046522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_PELFU9.588e-6161.8660S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_PARDA9.588e-6161.8660S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_ANOGA1.635e-6060.8260S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15_DICDI3.643e-6061.3460S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_CHITE3.643e-6058.7660S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_DROME8.974e-5959.2860S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15B_SCHPO8.974e-5960.4260S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO1.999e-5860.4260S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_CAEEL1.751e-5455.1560S ribosomal protein L15 OS=Caenorhabditis elegan... [more]
RL15_ORCLI2.287e-5455.2160S ribosomal protein L15 OS=Orconectes limosus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_8E12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8E12-I24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046522 ID=CX046522; Name=CX046522; organism=Citrus sinensis; type=EST; length=863bp
TAAGGCTCTTATAATTCACGGTAGACTCAAGAAACACAAATGTCTTAATT
TAGAATGTAAGGTTTCAAAATAAGATATGTTCCATAGTATTTCAATCTCT
AAAAGACTCAAAATGGCAACTACTATGTCCTCCAGACAAAATCCCTCAAC
TGATGATAAAACATCAAAACCATAACAATGATCAACGGTAGCGACGGAGG
GAAAGAGTATTGTTTCTCTTCCAGGTAGCCCTGCGCGAAGGCCGAGCCTT
GTGGTGCAAGTGTCCTTTTCCACGTAGGCCTCTGTACTTCTTACCTGCAG
AAGTAAGACCACGGAGTTCCCTGTGCTTATGGACAGGATTGCATAACCAA
TTAATTCTTGGGTCATTTCGGATGGCATTATGAGCAGGATCAACCAAGAT
CACCTCAAAGTACTTATAAGTGGAGTCCTCATTGATCCAGTAAGAATTGA
GAACCCTAAGACCTCCCAACTTACGACCGGCACGCTCCTCTGCAACAGAC
CTCTTGCTGCGCTGAAACTTCAGTTGAGTAACACCCTGGTTTGTGGGTTT
ACCATACACAATGCCCTTGGGAACAGGCCTCTTCCGACCACCACGCCTTA
CCCGCACACGATAAACAACATAACCCTGCTTGGCCTTGTAACCCAAGCGT
CGAGCCTTGTCAGGTCGAGTGGGACGGGTGACCCTAACAATAGATGGATG
TTGGCGGTACTCCCAACACCTCACCCTCTGCAAGAACCTCATCACATCTG
ACTGCTTCTTCCTCCATAGCTCCGACACGAACGTGTAAGCCCCCATTGGC
TCTGAGCTGAGCTGAGCTGAGCTGCGCAGTATCCGTGCGACTAGGGTTTT
GGGGGCCCGGTAC
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