EY680367

Overview
NameEY680367
Unique NameEY680367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   47 SFIDQWLEAEGQSFNPPSSALVFQLALAPRM-NIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQK 406
            + +D WLE E   + P  + ++FQ  + P M     DE V+++N EKL KVL+VYE RL + ++LAGD  S+ADLSH+      + AT    +L +  +V  WW ++  R S +KV  + K
Sbjct:   93 AMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 2
Query:   26 GSTHSSESFIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 391
            G      + +D WLE E    +PP+ A+V +   AP +  ++++ V+ +N EKL KVL+VYE RL    +LAGD  SLADLS     H L+ AT+   ++ +  +V  WW  ++ R +  KV
Sbjct:   88 GGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLM-ATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 2
Query:   65 LEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 391
            ++ E   F+P +S L F+        +  DE V+ + E KLAKVLDVYE RL E ++LAG+ F+L DL H+P   YL+  T   ++ T R  V  W  EI+ R + +KV
Sbjct:  104 MQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLL-GTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 2
Query:   47 SFIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQK 406
            + +D W+E E   +    + ++FQ+ ++P +    D+ V+ +N EKL KVL+VYE RL + ++LAGD  SLADL+H+ +    + AT    +L +  +V  WW  +  R S +KV  + K
Sbjct:   93 AMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHV-SVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 2
Query:   65 LEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 394
            ++ E   F+P +S L ++        +  D+ V+ + E KLAKVLDVYE RL E ++LAG+ F+L DL H+P   YL+  T   ++ T R  V  W  EI+ R + +KV+
Sbjct:  104 IQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLL-GTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 2
Query:   47 SFIDQWLEAEGQSFNPPSSALVFQLALAPRMN-IKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQKQQ 412
            + +D W E E   +N   S +V++  + P M  I  ++ V+ ++ EKL KVL+VYE RL +S +LAGD  S ADL+H P   Y +  T    +  S  +V  WW  +  R S KK+  +   Q
Sbjct:   96 AMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFM-GTPYASLFDSYPHVKAWWERLMARPSVKKLAAVMAPQ 217          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   47 SFIDQWLEAEGQSFNPPSSALVFQLALAPRM----NIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 391
            + +D W E E Q + P  S +VF+  + P +        ++ V+ ++ E+L  VL +YE RL +SR+LAGD  S ADL+H+P   Y +  T   ++      V  WW  +  R + ++V
Sbjct:   98 AMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFM-TTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of EY680367 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   47 SFIDQWLEAEGQSFNPPSSALVFQLALAPRM----NIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 391
            + +D W E E Q + P  S +VF+  + P +        ++ V+ ++ E+L  VL +YE RL +SR+LAGD  + ADL+H+P   Y +  T   ++      V  WW  +  R + ++V
Sbjct:   98 AMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFM-TTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
The following BLAST results are available for this feature:
BLAST of EY680367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTF2_ORYSJ2.711e-1738.02Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF4_MAIZE2.997e-1636.89Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF4_ARATH5.112e-1640.37Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF1_MAIZE8.720e-1635.00Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GST16_ARATH1.943e-1538.18Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF1_ORYSJ5.652e-1535.77Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF2_WHEAT5.849e-1231.93Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF1_WHEAT1.303e-1131.09Glutathione S-transferase 1 OS=Triticum aestivum G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-C11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680367 ID=EY680367; Name=EY680367; organism=Citrus sinensis; type=EST; length=702bp
TGGGCCTGCGTACGGTCGGGATTCCGGGTCGACCCACTCGTCCGAAAGCT
TCATAGATCAGTGGCTGGAAGCCGAGGGGCAAAGCTTTAACCCGCCAAGC
TCTGCTCTAGTGTTTCAACTAGCACTCGCTCCTCGAATGAACATCAAGCA
AGACGAAGGAGTAATCAAACAGAATGAAGAAAAGCTGGCAAAAGTGCTCG
ATGTTTATGAGAAGAGGCTGGGGGAGAGTCGGTTCTTGGCTGGGGATGAA
TTTTCTTTGGCTGATCTTTCACACTTGCCTAATGCGCATTATTTGGTGAA
TGCAACTGATAGAGGAGAGATTTTAACTTCCAGGGATAATGTGGGGAGAT
GGTGGGGTGAGATTTCGAACAGAGATTCATGGAAGAAGGTGGTTGATATG
CAGAAACAGCAGCACAGTCCTTGAATGGTGTACAGTTCACTCCTCTCGTA
TACCCTAACATCCCTAGAATTCTTGCTTCATGTACCTCTAAACTAGTTAT
GTAAGAATAAATACACGTGTAGCAAGAATCCTGACAGCAATTTTTCTGAT
TTTTCATAGTCTGTTTAGTTGTTTGAATTGTGATCGGTACTGTATGATTC
AAGTATATGGCATGGTCTAAAAATTTTCCATGGCTAAGGGATAAAAATAT
GGCTCACAGTTGGAAAAAAGTATGGCTTTCATAAAAAAAAAAAAAAAAGG
GG
back to top