DN618239

Overview
NameDN618239
Unique NameDN618239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PSEFS (Adenine phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=apt PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = -2
Query:  366 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVL 593
            Y  EYG+  +E+H  ++  G+  L+ DDL+ATGGTL AA  L+ R+G  + E A +I+LPEL G +RL E   P F L
Sbjct:   97 YQTEYGEAFLEVHADSLCEGDSVLMFDDLIATGGTLIAAANLVRRMGAKIFEAAAIIDLPELGGSQRLEEMGIPTFCL 174          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PHOLL (Adenine phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=apt PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y+LEYG D +EMH  +V+  ++ L++DDL+ATGGT+ A +RL+ R+G  V E A +I L  L G ERL
Sbjct:  100 YNLEYGTDTLEMHKDSVRENDKVLVIDDLLATGGTVEATVRLIRRLGGEVSEAAFIIGLLGLGGVERL 167          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_MYXXD (Adenine phosphoribosyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=apt PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            YSLEYG D +EMH  A+  GER L+VDD++ATGGT  A  RL+ R+G  +V    ++ L  L+G  RLG + +  L++
Sbjct:  106 YSLEYGSDGVEMHEDAILQGERVLVVDDVLATGGTAEATARLVSRLGGELVGFCFLLSLDFLEGPNRLGRERVTTLLT 183          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_LEUCK (Adenine phosphoribosyltransferase OS=Leuconostoc citreum (strain KM20) GN=apt PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = -2
Query:  390 YSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            YSLEYG ++V+E+H  A++ G+R LIVDDL+ATGGT++A   ++E++G  V   A +IEL +L GRE++
Sbjct:   94 YSLEYGGENVLEIHQDAIKPGQRVLIVDDLLATGGTINATREIIEKLGGIVAGVAFIIELTDLHGREKI 162          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_HAEDU (Adenine phosphoribosyltransferase OS=Haemophilus ducreyi GN=apt PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y+LEYG+D +EMH+ ++   +  L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LP+L G+ RL
Sbjct:   96 YALEYGEDTLEMHLDSINQDDNVLVVDDLLATGGTIDATAKLIRQLGGQVKNAAFVIGLPDLGGKARL 163          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_XANOR (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae GN=apt PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 593
            Y+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:  107 YALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_XANOP (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=apt PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 593
            Y+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:  107 YALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_XANOM (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=apt PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 593
            Y+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:  107 YALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_VIBVY (Adenine phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=apt PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   98 YELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_VIBVU (Adenine phosphoribosyltransferase OS=Vibrio vulnificus GN=apt PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   98 YELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
The following BLAST results are available for this feature:
BLAST of DN618239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PSEFS3.237e-1246.15Adenine phosphoribosyltransferase OS=Pseudomonas f... [more]
APT_PHOLL3.237e-1250.00Adenine phosphoribosyltransferase OS=Photorhabdus ... [more]
APT_MYXXD3.237e-1246.15Adenine phosphoribosyltransferase OS=Myxococcus xa... [more]
APT_LEUCK3.237e-1250.72Adenine phosphoribosyltransferase OS=Leuconostoc c... [more]
APT_HAEDU3.237e-1247.06Adenine phosphoribosyltransferase OS=Haemophilus d... [more]
APT_XANOR4.227e-1246.84Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_XANOP4.227e-1246.84Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_XANOM4.227e-1246.84Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_VIBVY4.227e-1248.53Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_VIBVU4.227e-1248.53Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618239 ID=DN618239; Name=DN618239; organism=Citrus sinensis; type=EST; length=594bp
CCCCCTTTTTTTTTTTTTATAAAGAGACGAGTTGAATTGCGGTTTAATTC
ACACATGATACATCAACAACCATCAGATAGAATCTCCAGATAATTTGAAA
AGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTTTCATAAGCCTA
TCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTTCCCCACCACTC
TTTCCCCAACGTCTTAAATAAAATAAAAAGCCAATGAAACTGCTCTTATA
TTACCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCAGAGCCCGAGCGA
CTAGAAACCCATATGGTCCACAAACATTGCATTTAAACCATAACCTGAGG
TCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTCCCAGCCGTTCCC
GACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACACTCAACCACATGC
ACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAAGGTCCCACCAGT
TGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTGCTTGTACAGCAC
CTACATGCATCTCCATTACATCTTTTCCATATTCCAAGGAATAC
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