DN618239

Overview
NameDN618239
Unique NameDN618239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_RUBXD (Adenine phosphoribosyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=apt PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG D +E+H  A+  G R L+ DDL+ATGGT  A   L+E+ G  V  CA +IEL  L+GR++L
Sbjct:  100 YELEYGTDSLEVHADAIPPGTRVLVADDLLATGGTARAMCELVEKSGGSVAGCAFLIELGFLEGRKKL 167          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_NITMS (Adenine phosphoribosyltransferase OS=Nitrosopumilus maritimus (strain SCM1) GN=apt PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = -2
Query:  384 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 593
            Y++EYGKD +E+    ++ G+R LI DDL+ATGGT  AA +L+E+VG  +V  A +IEL +L G + + +
Sbjct:   92 YTIEYGKDTIEIQKDIIEEGQRVLICDDLLATGGTAKAAAKLIEKVGGKIVGFAFIIELTDLNGMKGISK 161          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_LEUMM (Adenine phosphoribosyltransferase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=apt PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  363 YSLEYGK-DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---GEKPLFVLV 593
            Y+LEYG  + +E+H  A++ G+R LIVDDL+ATGGT++A   ++E++G  V   A +IEL  L+GRE++   GE P   L+
Sbjct:   94 YTLEYGGVNELEIHKDAIKPGQRVLIVDDLLATGGTINATREIIEKLGGIVAGVAFIIELESLQGREKIMKAGEVPFLALM 174          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_BIFLO (Adenine phosphoribosyltransferase OS=Bifidobacterium longum GN=apt PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            Y LEYG   +E+   AVQAG+R LIVDDL+ATGGT  AA  L+E+ G  VV  + V+ L  L G ++L  KP   L++
Sbjct:  113 YDLEYGTASVEIETDAVQAGKRVLIVDDLIATGGTAKAATDLIEKAGGTVVGFSFVMRLDGLDGLDKLDGKPSSSLIA 190          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_BIFLD (Adenine phosphoribosyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=apt PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            Y LEYG   +E+   AVQAG+R LIVDDL+ATGGT  AA  L+E+ G  VV  + V+ L  L G ++L  KP   L++
Sbjct:  113 YDLEYGTASVEIETDAVQAGKRVLIVDDLIATGGTAKAATDLIEKAGGTVVGFSFVMRLDGLDGLDKLDGKPSSSLIA 190          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_XANC5 (Adenine phosphoribosyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=apt PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER-LGEKPLFVLVS 593
            Y+LEYG D +EMH  A+  G R LIVDD++ATGGTL AA+ L  ++ + VV  A ++EL  L+GR++   + PL   +S
Sbjct:  107 YALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQVLQGRQKWANDVPLLATLS 185          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_XANAC (Adenine phosphoribosyltransferase OS=Xanthomonas axonopodis pv. citri GN=apt PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER-LGEKPLFVLVS 593
            Y+LEYG D +EMH  A+  G R LIVDD++ATGGTL AA+ L  ++ + VV  A ++EL  L+GR++   + PL   +S
Sbjct:  107 YALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQGLQGRQKWANDVPLLATLS 185          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_SALAI (Adenine phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=apt PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 593
            Y+LEYG+  +E+H  A  AG R L+VDD++ATGGT  A + L+ER G  V     ++EL  L GRERL  + +  L++
Sbjct:  110 YALEYGEATLEVHQDAFTAGHRVLVVDDVLATGGTAQATLDLVERAGGTVAGFTVLLELGFLGGRERLAPRAVHALLT 187          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PSESM (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=apt PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = -2
Query:  384 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 593
            Y  EYG+  +E+H  ++  G   ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G +RL +
Sbjct:   97 YQTEYGEAYLEVHADSLCEGNSVIMFDDLIATGGTLIAAANLIRRMGAQVHEAAAIIDLPELGGSKRLND 166          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_PSEA6 (Adenine phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=apt PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = -2
Query:  384 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 593
            Y LEYG D +E+H  AV+ GE+ L++DDL+ATGGT+ A   L+ R+G  V     VI LP+L G  +L E
Sbjct:   95 YDLEYGTDCLEIHEDAVKPGEKVLMLDDLLATGGTMIATANLIRRLGGIVEHAGFVISLPDLGGEAKLQE 164          
The following BLAST results are available for this feature:
BLAST of DN618239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_RUBXD1.230e-1150.00Adenine phosphoribosyltransferase OS=Rubrobacter x... [more]
APT_NITMS1.230e-1145.71Adenine phosphoribosyltransferase OS=Nitrosopumilu... [more]
APT_LEUMM1.230e-1145.68Adenine phosphoribosyltransferase OS=Leuconostoc m... [more]
APT_BIFLO1.230e-1148.72Adenine phosphoribosyltransferase OS=Bifidobacteri... [more]
APT_BIFLD1.230e-1148.72Adenine phosphoribosyltransferase OS=Bifidobacteri... [more]
APT_XANC51.606e-1146.84Adenine phosphoribosyltransferase OS=Xanthomonas c... [more]
APT_XANAC1.606e-1146.84Adenine phosphoribosyltransferase OS=Xanthomonas a... [more]
APT_SALAI1.606e-1144.87Adenine phosphoribosyltransferase OS=Salinispora a... [more]
APT_PSESM1.606e-1145.71Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_PSEA61.606e-1148.57Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618239 ID=DN618239; Name=DN618239; organism=Citrus sinensis; type=EST; length=594bp
CCCCCTTTTTTTTTTTTTATAAAGAGACGAGTTGAATTGCGGTTTAATTC
ACACATGATACATCAACAACCATCAGATAGAATCTCCAGATAATTTGAAA
AGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTTTCATAAGCCTA
TCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTTCCCCACCACTC
TTTCCCCAACGTCTTAAATAAAATAAAAAGCCAATGAAACTGCTCTTATA
TTACCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCAGAGCCCGAGCGA
CTAGAAACCCATATGGTCCACAAACATTGCATTTAAACCATAACCTGAGG
TCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTCCCAGCCGTTCCC
GACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACACTCAACCACATGC
ACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAAGGTCCCACCAGT
TGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTGCTTGTACAGCAC
CTACATGCATCTCCATTACATCTTTTCCATATTCCAAGGAATAC
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