CX046459

Overview
NameCX046459
Unique NameCX046459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.774e-38
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 437
            ATYKVKL+TP G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQ+ EGFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_DATIN (Ferredoxin OS=Datura inoxia PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.774e-38
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 437
            ATYKVKL+TP G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQ+ EGFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.929e-38
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 431
            ATYKV L TP G++ I CPDD++ILDAAEEAGLDLPYSCRAGACSSC GKV +GTVDQS+QSFLDD Q+  GFVLTC AYPTSD TI THKEE+L
Sbjct:    1 ATYKVTLKTPSGDQTIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.929e-38
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 437
            ATYKVKL+TP G  E NCPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQI +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDLTG 97          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_HORVU (Ferredoxin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 431
            ATYKVKL+TP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +DQS+QSFLDDDQ+ EG+VLTCAAYP SDV IETHKEEEL
Sbjct:    1 ATYKVKLVTPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEEL 95          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38
Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 3
Query:    6 MATLSSAMVSTSFIRSKPTATSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 431
            MAT+ S+  + +F      + SL+A P    A   +      R+ A ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG++DQS+QSFLDD Q+ +G+VLTC AYPTSDV IETHKE++L
Sbjct:    1 MATVLSSPRAPAF------SFSLRAAPATTVA---MTRGASSRLRAQATYNVKLITPEGEVELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKEDDL 133          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_DATAR (Ferredoxin OS=Datura arborea PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.098e-37
Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 437
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.098e-37
Identity = 72/95 (75.79%), Postives = 81/95 (85.26%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 431
            ATYKVKL+TP G++E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV  G VDQS+ SFLDD+QIGEG+VLTC AYP SD TIETHKEEEL
Sbjct:    1 ATYKVKLVTPSGQQEFQCPDDVYILDQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37
Identity = 74/96 (77.08%), Postives = 82/96 (85.42%), Query Frame = 3
Query:  147 ATYKVKLITPGGEE-EINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 431
            ATYKVKL+TP G+  E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV +G VDQS+ SFLDDDQIGEG+VLTC AYPTSDV IETHKEEEL
Sbjct:    1 ATYKVKLVTPSGQPLEFECPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWVLTCVAYPTSDVVIETHKEEEL 96          
BLAST of CX046459 vs. ExPASy Swiss-Prot
Match: FER_SAMNI (Ferredoxin OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37
Identity = 71/95 (74.74%), Postives = 84/95 (88.42%), Query Frame = 3
Query:  147 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 431
            A+YKVKLITP G +E  CPDD +IL+ AEE G+D+PYSCRAG+CSSC GK+V+G+VDQS+QSFLDD+QI EG+VLTC AYP SDVTIETHKEEEL
Sbjct:    1 ASYKVKLITPDGPQEFECPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEEL 95          
The following BLAST results are available for this feature:
BLAST of CX046459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_DATME3.774e-3875.26Ferredoxin OS=Datura metel PE=1 SV=1[more]
FER_DATIN3.774e-3875.26Ferredoxin OS=Datura inoxia PE=1 SV=1[more]
FER_SCEQU4.929e-3877.89Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1[more]
FER1_HYONI4.929e-3875.26Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_HORVU8.408e-3876.84Ferredoxin OS=Hordeum vulgare PE=1 SV=1[more]
FER5_MAIZE8.408e-3857.75Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE... [more]
FER_DATAR1.098e-3774.23Ferredoxin OS=Datura arborea PE=1 SV=1[more]
FER_COLES1.098e-3775.79Ferredoxin OS=Colocasia esculenta PE=1 SV=1[more]
FERB_ALOMA1.434e-3777.08Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1[more]
FER_SAMNI1.873e-3774.74Ferredoxin OS=Sambucus nigra PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_8B06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-8B06-C12-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046459 ID=CX046459; Name=CX046459; organism=Citrus sinensis; type=EST; length=721bp
CAACAATGGCCACCCTCTCAAGCGCCATGGTCAGCACCTCATTCATCAGA
AGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCAGGC
TATATTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGGCTA
CATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAACTGT
CCTGATGACTCGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCT
TCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTTG
TGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAA
ATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGT
TACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTC
TTGATATCTCATTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATT
ATTTTAATGCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTA
ATGTGTTTTTATTTCTTGTTGCAAAGAAGTTGTTGTAATTGCACCGGCCA
TGAATGCGCATCGTACCTAGAGGGTGAGGTTTCTCATCCCATCCGAACAT
GGTACCGTTCTATAATTAAGAGTCAAGCAAGAACAATAGATCTTTCGTTT
TATGTCATCGGTATTTTCCCT
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