CX046408

Overview
NameCX046408
Unique NameCX046408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.562e-81
Identity = 139/246 (56.50%), Postives = 176/246 (71.54%), Query Frame = -1
Query:   55 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMA 780
            ++S+E+F+ LL +RND  CPARGFYTYDA + AA AFP F  +G++  RKRE+AAF  QT HETTGGW  AP G Y+WGYCF  E+   + YC P+  +PC    KY+GRGPIQLS+NYNY             LNNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI  +W PS+ D+ AGR+PGYG+ TNIINGG+ECG G +  V NRIGF+  +C   GI  G +LDCY+QRP+   L A
Sbjct:   89 VVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNY--GPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.768e-80
Identity = 137/243 (56.38%), Postives = 175/243 (72.02%), Query Frame = -1
Query:   73 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP-NYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 792
            ++G+++   +FD +L+YRND RC   GFYTYDAFI AA++F GFG +G++  +K+E+AAF AQT HETTGGWP AP G YAWGYCF+SE +    YC P ++PC    KYYGRGPIQL+ NYNY             +NNPDLL+T+P +SFK+AIWFWMT Q  KPS H+VI   W PSA D +AGR+PGYG+ TNIINGGIECG G +  V +R+GF+  +C  FG+ PG +LDC NQR +
Sbjct:   79 DVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.553e-79
Identity = 137/227 (60.35%), Postives = 169/227 (74.45%), Query Frame = -1
Query:  127 ELGKIISREMFDDLLEYRNDERCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCG 792
            ++G +IS  MFD +L++RND  C  +  FY+Y+AFI AA++F GFG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+  +CG
Sbjct:   77 DIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.655e-78
Identity = 139/243 (57.20%), Postives = 169/243 (69.55%), Query Frame = -1
Query:   73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789
            +  IIS   FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR++AAF AQT HETTGGW  AP G +AWGYCF  E    +DYC P+  +PC    +YYGRGPIQLS NYNY             L NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR PG+G+ TNIINGG+ECG G ++ V +RIGF+  +C   G+  GD+LDCYNQRP+
Sbjct:   25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.161e-78
Identity = 140/243 (57.61%), Postives = 172/243 (70.78%), Query Frame = -1
Query:   73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789
            +  I+SR +FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKRE+AAF AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK YYGRGPIQLS NYNY             L NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+NGGIECG G ++ V +RIGF+  +C    +  G++LDCYNQRP+
Sbjct:   80 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.823e-78
Identity = 137/244 (56.15%), Postives = 170/244 (69.67%), Query Frame = -1
Query:   73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSD-YCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789
            +  IIS  +FD +L +RND+ C A+GFYTYDAF+ AA A+P F  +G+    KRE+AAF AQT HETTGGWP AP G Y+WGYCF  E +  +  YC+P   +PC    KYYGRGPIQ+++NYNY             LNNPDL+A+D  +SFK+A WFWMT Q PKPSCH VI  +W PSA+D  AGR+PGYG  TNIINGG+ECG G +  V +RIGF+  +C   G+  GD+LDCYNQRPY
Sbjct:   76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.823e-78
Identity = 138/243 (56.79%), Postives = 169/243 (69.55%), Query Frame = -1
Query:   73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789
            +  I+SR  FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   +KRE+AAF AQT HETTGGW  AP G +AWGYCF  E    SDYC P+  +PC    +YYGRGPIQLS NYNY               NPDL+ATD  + FK+AIWFWMTAQPPKPS H VI  +W PS  D  AGR+PG+G+ TNIINGGIECG G ++ V +RIGF+  +C   G+  G++LDCY+QRP+
Sbjct:   25 VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLA--NPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.815e-78
Identity = 135/245 (55.10%), Postives = 169/245 (68.98%), Query Frame = -1
Query:   73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789
            +  I+SR +FD +L +RND  CPA+ FYTYDAF+ AA AFP F  +G+   RKRE+AAF AQT HETTGGW  AP G Y+WGYCF  E +    SDYC     +PC    KYYGRGPIQ+S+NYNY             L+NPDL+A+D  +SFK+A WFWMT Q PKPSCH V+  +W P+ ND  AGR+PGYG+ TNIINGG+ECG G ++ V +RIGF+  +C   G+  G +LDCYNQRP+
Sbjct:   79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 290.426 bits (742), Expect = 8.212e-78
Identity = 139/243 (57.20%), Postives = 171/243 (70.37%), Query Frame = -1
Query:   73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789
            +  I+SR +FD +L +RND  C A+GFYTYDAF+ AA AF GFG +G    RKRE+AAF AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK YYGRGPIQLS NYNY             L NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+NGGIECG G ++ V +RIGF+  +C   G+  G++LDCY+QRP+
Sbjct:   77 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317          
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.450e-76
Identity = 130/244 (53.28%), Postives = 165/244 (67.62%), Query Frame = -1
Query:   70 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 789
            +  +IS+ +F+ +L +RND  C A+GFYTY+AFI A + F  FG +G+   R +EIAAF AQT HETTGGW  AP G Y+WGYC+  E   P DYC     +PC    KY+GRGPIQ+S+NYNY              NNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+PG+G+ TNIINGG+EC  G NA + NRIGF+  +C   G+ PG++LDC NQRP+G
Sbjct:    5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLL--NNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246          
The following BLAST results are available for this feature:
BLAST of CX046408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI9_ORYSJ3.562e-8156.50Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIX_PEA1.768e-8056.38Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI4_SOLTU2.553e-7960.35Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SECCE1.655e-7857.20Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHIA_SECCE2.161e-7857.61Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI3_ORYSJ2.823e-7856.15Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_HORVU2.823e-7856.7926 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI1_ORYSJ4.815e-7855.10Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_HORVU8.212e-7857.2026 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHID_SOLLC3.450e-7653.28Basic endochitinase (Fragment) OS=Solanum lycopers... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7G08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7G08-M15-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046408 ID=CX046408; Name=CX046408; organism=Citrus sinensis; type=EST; length=831bp
CCTTTTATTAAGCTTATTTTACTAAAACGTTGATCATGATGATCACATAG
ATTGTGCCATCAGATTAAGGCCATAAGGTCGTTGGTTGTAGCAATCAAGA
CTGTCACCAGGCTGAATCCCAAACTTGCCACAGAAAGTGGTAAAGAACCC
AATACGGTTACGTACAGCGGCATTCCCACCTTGGCCACATTCAATTCCAC
CGTTGATTATATTTGTGGTTAGACCGTATCCCGGAAGCCGGCCGGCGTTT
ACGTCATTTGCTGATGGTTTCCATTCGTCGATAATGACTTCGTGGCACGA
TGGCTTTGGTGGCTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATG
ATAGTACTGGATCAGTAGCAAGAAGGTCTGGATTGTTCAACAACTCCTCT
CCTAGCCCTAGGCCTTCTCCGCACCGTAAGTAATTGTAATTCCAAGAGAG
TTGAATTGGACCTCGGCCATAGTACTTCCCTCGACATGGATAGTTAGGAT
CACAGTAGTCGGACGGAGGGCTAACTTCGCTTATAAAGCAATATCCCCAA
GCATATTCGCCACCAGGTGCATCGGGCCATCCCCCAGTAGTTTCATGGCC
AGTTTGGGCAAAAAAGGCAGCGATTTCTCTTTTACGCATGGTTTCATTTC
CAGAGTTACCAAAGCCTGGAAAAGCTTGGGCTGCCTCTATAAAAGCATCA
TAAGTGTAGAAGCCTCTGGCAGGGCATCGTTCATCATTTCTATACTCAAG
CAAGTCATCAAACATCTCCCTTGAGATGATCTTGCCCAGTTCACCGCCAT
GCGTCCCATGGCCGGTATCACGTCCACCGTA
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