CX046408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 7.211e-66 Identity = 115/239 (48.12%), Postives = 153/239 (64.02%), Query Frame = -1 Query: 73 SREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP----NYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 774 + MF+ +L RN++ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFFAQT ET+G + WGYC ++E++P SDYCDP +YPC YYGRGP+QL WNYNY C L+ P+ +ATDPVLSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC + G +NRI ++ +C + PGD+L C NQ + Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.973e-65 Identity = 125/244 (51.23%), Postives = 158/244 (64.75%), Query Frame = -1 Query: 73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEV----SPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789 +G +I++ +F+ +L R++ +CPARGFYTYDAFI AA +FP FG SG + +RE+AAFF QT HETTGG + ++ WGYCF E+ SPP YYGRGPIQL+ NY NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D AGR+PGYG+ TNIINGGIECG G N A +RIG++ +C G G +LDCYNQR + Sbjct: 32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNYQAAGNALGLDLV--GNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58 Identity = 111/252 (44.05%), Postives = 159/252 (63.10%), Query Frame = -1 Query: 49 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQS 789 + +++ + F+ +L +R+D CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ SD+C PN +PC GK Y+ RGP+Q+++NYNY L NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G +LDC+ Q P+ ++M+ S Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.244e-58 Identity = 111/252 (44.05%), Postives = 158/252 (62.70%), Query Frame = -1 Query: 49 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQS 789 + +++ + F+ +L +R+D CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ SD+C PN +PC GK Y+ RGP+Q+++NYNY L NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G +LDC+ Q P+ +M+ S Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.037e-56 Identity = 111/239 (46.44%), Postives = 146/239 (61.09%), Query Frame = -1 Query: 73 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 789 + +IS +F+ +L +R GFYTYDAFI AA++FP F +G+ +RKRE+AAF AQT HETTGGWP AP G Y E+ SDY +GRGPIQ+S+NYNY NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG+G + V +RIG++ D+LDCYNQ+P+ Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSDY-----------FGRGPIQISYNYNYGAAGKAIGVDLL--RNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.851e-37 Identity = 86/232 (37.07%), Postives = 130/232 (56.03%), Query Frame = -1 Query: 97 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVS-PPSDYC-DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSL 780 +++ +FD + +R D CP++GFY+Y +F+ AA++FP FG G+ RKRE+AAF A T+G D +AWG C I+ + +D+C ++PC KY RGPIQL+ N+NY + NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G A + IGF+ +C G+ G L Sbjct: 133 VVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF--GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.559e-36 Identity = 88/239 (36.82%), Postives = 125/239 (52.30%), Query Frame = -1 Query: 91 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD---PNYPC-RGK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 789 + I++ E F L+ + D+ C A+GFYT DAF+ AA +P FG +G+ KREIAAFFA HET +C+I E+ PS +YCD +PC GK YYGRGP+Q+SWN+NY L +PD +A PVL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ FC +FG+ PG +L C Sbjct: 68 VASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.583e-35 Identity = 84/230 (36.52%), Postives = 124/230 (53.91%), Query Frame = -1 Query: 91 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 780 I+++E +D + + CP + FYT F+EA A+PGFG + RKREIAA+FA HET +A YC S+ P C+PN +Y+GRGP+QLSWNYNY+ LN+PD++ DP++SFK+++WFW+ + VI+D P+ G+G T IINGG EC A + R+G++ +C + G+ PG++L C Sbjct: 49 IVTQEFWDGIAS-QAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPN----KEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.573e-34 Identity = 78/217 (35.94%), Postives = 111/217 (51.15%), Query Frame = -1 Query: 91 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP---NYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 726 C + FYT AF+ A + +PGF + G++ KREIAAFFA HET +C+ISE++ + YCDP +PC KYYGRGP+Q+SWNYNY L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG A + R+G++ +C + G+ PG +L C Sbjct: 89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.621e-33 Identity = 90/238 (37.82%), Postives = 114/238 (47.90%), Query Frame = -1 Query: 91 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 780 I+S+ FD ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C I E YCD + YPC KYYGRGP+QLSWNYNY L NP+ +ATD SFK+A+WFWMT +V++ G+G TT ING +EC +RI F+ +C FG+ PGD+L C Sbjct: 90 IVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288 The following BLAST results are available for this feature:
BLAST of CX046408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046408 ID=CX046408; Name=CX046408; organism=Citrus sinensis; type=EST; length=831bpback to top |