CX046408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.621e-33 Identity = 83/232 (35.78%), Postives = 116/232 (50.00%), Query Frame = -1 Query: 91 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 768 E F + ++ + C + FYT +F+ AA ++ GF KREIAAFFA HET C+I+E++ S DYCD N +PC+ KYYGRGP+Q+SWNYNY L +PD +A DP +SFK+A+WFWM N+V+ L G+G T ING +EC AV R+ ++ +C +FG+ PG +L C Sbjct: 93 EAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.766e-33 Identity = 78/217 (35.94%), Postives = 110/217 (50.69%), Query Frame = -1 Query: 91 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 726 C + FYT AF+ A A+PGF + G E KREIAAFFA HET +C+ISE++ + YCD + +PC KYYGRGP+Q+SWNYNY L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC A + R+G++ +C + + PG +L C Sbjct: 100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 6.161e-33 Identity = 84/239 (35.15%), Postives = 124/239 (51.88%), Query Frame = -1 Query: 91 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 789 +G I+++ F+ ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+I E++ S DYCD N YPC GK Y+GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM + P ++++ G+G T ING +EC G + AV RI ++ +CG+ G+ PG +L C Sbjct: 72 VGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLL--GQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 3.058e-32 Identity = 80/232 (34.48%), Postives = 117/232 (50.43%), Query Frame = -1 Query: 91 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 768 E F + ++ + C + FYT +F+ AA+++ GF N KREIAAFFA HET C+I+E++ + DYCD + +PC+ KYYGRGP+Q+SWN+NY L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG +L C Sbjct: 90 EAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.376e-30 Identity = 79/237 (33.33%), Postives = 117/237 (49.37%), Query Frame = -1 Query: 91 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD----PNYPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 780 I++ + + +++ + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+I E+ S DYCD YPC Y+GRGPIQLSWN+NY L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C + G+ GD+L C Sbjct: 71 ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CX046408 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = -1 Query: 187 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 324 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CX046408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046408 ID=CX046408; Name=CX046408; organism=Citrus sinensis; type=EST; length=831bpback to top |