CX046330

Overview
NameCX046330
Unique NameCX046330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.513e-26
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 1
Query:  103 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVG 612
            L  NFY  TCP+  DIIR+ +      +  TA + +R  FHDC    CDAS+L+ ST    +E++   +  +    F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+H +G
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIG 192          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 62/168 (36.90%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  115 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVGR 615
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CD SLLLD T    SEK    +    R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+    +V+L G+H  GR
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGR 204          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 62/170 (36.47%), Postives = 92/170 (54.12%), Query Frame = 1
Query:  103 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVG 612
            L  NFY  +C  AE ++R  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H +G
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIG 195          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 62/171 (36.26%), Postives = 95/171 (55.56%), Query Frame = 1
Query:  112 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHRVGRT 618
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++  + +RF  +G+D +  LVAL G H  G++
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKS 197          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 69/174 (39.66%), Postives = 99/174 (56.90%), Query Frame = 1
Query:  103 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVG 612
            L  NFY+ +CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H +G
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIG 194          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.312e-26
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 1
Query:  103 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVG 612
            L ++FY  +CP+  DIIRE +         TA + LR  FHDC    CDAS+L+ ST    +E++   +  +    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H +G
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIG 203          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.312e-26
Identity = 67/173 (38.73%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  103 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTL-SEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVGR 615
            L   FY  TCP    I+R  V+   +       S +R  FHDC V  CD SLLLD+   T+ SEK+ +  +   R F  ++NIK AVE  CPGVVSC DIL L+    V   GGP   +  GRRD R +        LP   ++++ + ++F  +G++   LVAL G+H  GR
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGR 197          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.312e-26
Identity = 64/181 (35.36%), Postives = 94/181 (51.93%), Query Frame = 1
Query:   85 NEEDPGLVMN----FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVG 612
            N    GL  N    FY  +CP+ + I++  V   +K     A S LR  FHDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H +G
Sbjct:   38 NGHGHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIG 218          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26
Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 1
Query:  103 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVG 612
            L   FY+ +CPQA++I+   ++    +    A S LR  FHDC VQ CDAS+LLD +    SEK        +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H +G
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIG 215          
BLAST of CX046330 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 1
Query:  115 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRVGRT 618
            +Y  +CP+AE I+R  V+  +      +   LR  FHDC VQ CD S+L+       +E+    + G+R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H +G+T
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQT 196          
The following BLAST results are available for this feature:
BLAST of CX046330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER31_ARATH2.513e-2636.05Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER54_ARATH5.598e-2636.90Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER46_ARATH5.598e-2636.47Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER38_ARATH5.598e-2636.26Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER16_ARATH5.598e-2639.66Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER63_ARATH7.312e-2635.47Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER15_IPOBA7.312e-2638.73Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER10_ARATH7.312e-2635.36Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER9_ARATH9.550e-2638.01Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER25_ARATH9.550e-2639.88Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_7C09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7C09-E17-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046330 ID=CX046330; Name=CX046330; organism=Citrus sinensis; type=EST; length=619bp
GAGAAAATGGGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTT
CTCAGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAG
GTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATT
ATCAGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATT
TTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATG
CTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATG
GACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGA
AGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTG
TCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCT
CTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGA
GCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGT
TTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCT
CACAGGGTTGGCAGAACTC
back to top