DN618149

Overview
NameDN618149
Unique NameDN618149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPM (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M28 GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEVLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRP8 (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M18 GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEVLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRP3 (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M3 GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEVLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRP1 (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M1 GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEVLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_PYRKO (Ribose-5-phosphate isomerase A OS=Pyrococcus kodakaraensis GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 34/84 (40.48%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +++KK  A +A+ +++  M +GLGTGST A+ ++ +G+LL  GEL D+ G+PTS +    A    IP+ +LD+  ++D+A+DGA
Sbjct:    4 EEMKKAVAKEALKFIEDEMVVGLGTGSTTAYFINYLGKLLMEGELEDVYGVPTSHQARLLALEAGIPVVSLDEVDAIDIAVDGA 87          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_PROMA (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 2
Query:  248 QDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            Q  +K   A +A+  +K GM LGLG+GSTAA ++  +G+ LK G L++I+G+PTS + E  A  L IPL        +DLAIDGA
Sbjct:    5 QTQMKIAVAQEAIGEIKDGMILGLGSGSTAALMIKSLGEKLKEGSLKEIIGVPTSFQGEVLASQLGIPLRAFSAVSKIDLAIDGA 89          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_SYNS3 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain CC9311) GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.402e-14
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 2
Query:  248 QDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            Q  +K+  A+ AV  ++ GM +GLG+GSTAA +++ +G  L  G+LRDIVG+ TS + E  A  L IPL  L+    +DLAIDGA
Sbjct:    5 QTQMKQAVAEAAVAQIRDGMVVGLGSGSTAALMIEGLGARLAAGQLRDIVGVTTSFQGEVLAAELGIPLRALNATDRIDLAIDGA 89          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRU0 (Ribose-5-phosphate isomerase A OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.402e-14
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YVK GM +GLGTGSTA F V++IG+ +    L+ +VG+ TS  T +QA+SL IPL  +D+   +DL +DGA
Sbjct:    4 LKKMAGVTAAQYVKDGMIVGLGTGSTAYFFVEEIGRRVNEEGLQ-VVGVTTSSATTKQAESLGIPLKAVDEIDEIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRSV (Ribose-5-phosphate isomerase A OS=Streptococcus sanguinis (strain SK36) GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.402e-14
Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++LKKLA  KA ++V+SGM +GLGTGSTA + V++IG+ +K   L+ I  + TS  T +QA+ L IPL ++DD   +D+ +DGA
Sbjct:    2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQ-ITAVTTSSVTSKQAEGLGIPLKSIDDVDQVDVTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRZJ (Ribose-5-phosphate isomerase A OS=Streptococcus pneumoniae (strain JJA) GN=rpiA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.137e-14
Identity = 39/84 (46.43%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++LKK+A  KA ++VK GM +GLGTGSTA + V++IG+ +K   L+ I+ + TS  T +QA+ LNIPL ++D    +D+ +DGA
Sbjct:    2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQ-IIAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGA 84          
The following BLAST results are available for this feature:
BLAST of DN618149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
RPIA_STRPM1.839e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRP81.839e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRP31.839e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRP11.839e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_PYRKO1.839e-1440.48Ribose-5-phosphate isomerase A OS=Pyrococcus kodak... [more]
RPIA_PROMA1.839e-1445.88Ribose-5-phosphate isomerase A OS=Prochlorococcus ... [more]
RPIA_SYNS32.402e-1447.06Ribose-5-phosphate isomerase A OS=Synechococcus sp... [more]
RPIA_STRU02.402e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus ub... [more]
RPIA_STRSV2.402e-1447.62Ribose-5-phosphate isomerase A OS=Streptococcus sa... [more]
RPIA_STRZJ3.137e-1446.43Ribose-5-phosphate isomerase A OS=Streptococcus pn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618149 ID=DN618149; Name=DN618149; organism=Citrus sinensis; type=EST; length=503bp
AGCCAAAGCCATCCAAAACACACACAGATAGATTGATCAACAACAACTTC
TCACAACTCACCTCTCATTTATTTTCCTCTCAAACTCACCCCATCACCAC
CACAGCCTCCGCCCAAGAAAAATGACTTCTTTATCCTTCCTCCCCACTCT
CCATCTCTCCACCTCCGCTCACTTCCTCCCACGCGCCCCCAAATCCCTCA
GACCACGCGCCATTTCCATCAAAGCCCAGGCCGTCCCGGCCCTCACCCAA
GACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGTTGACTACGTCAAATC
CGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCGCCGCCTTCGTCGTCG
ACAAGATCGGCCAACTCTTGAAAACCGGCGAGTTAAGGGACATCGTCGGA
ATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAAGTCGCTTAACATTCC
CTTAACCACACTTGACGATCACCCATCACTGGATTTGGCCATTGACGGCG
CCG
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