DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E          QL+E++++ LC  +++I  ++ N+ E++ P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECN--------QLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A1_NEUCR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Neurospora crassa GN=pph-1 PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 43/87 (49.43%), Postives = 66/87 (75.86%), Query Frame = 2
Query:  242 QLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP 502
            QL+ES++++LC  +R++   + N+  ++ P+ +CGD+HGQ+ DL+ LF+ GG  P  NYLF+GDYVDRG  S+ET+ LL+A KI+YP
Sbjct:   40 QLAESDVQRLCEKAREVLQDESNVQPVKCPVTVCGDIHGQFHDLMELFKIGGSCPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYP 126          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: YSD1_CAEEL (Putative serine/threonine-protein phosphatase C23G10.1 OS=Caenorhabditis elegans GN=C23G10.1 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 2
Query:  257 EIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEY--GGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +I +L    + IF  Q +++E++ P++ICGD+HGQY DL+RLF    GG+PP +NYLFLGDYVDRG  +LE I L LAYK +YP NF +
Sbjct:   64 DIFRLIHICKKIFTVQKSMVEIDGPVRICGDLHGQYPDLIRLFAQVLGGFPPDSNYLFLGDYVDRGSFNLEVILLCLAYKARYPNNFMM 152          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: YD44_SCHPO (Putative serine/threonine-protein phosphatase C22H10.04 OS=Schizosaccharomyces pombe GN=SPAC22H10.04 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            LD+II RL E       KQ+ ++ES I  LC  ++++ M++ N++ L  P+ + GD+HGQ+ DLL +F  GG  P  NYLFLGDYVDRG  S+ETI LL+  K++YP+   L
Sbjct:    4 LDNIIERLYE-------KQL-IAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITL 107          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C2_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 2 OS=Caenorhabditis elegans GN=pph-4.2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + E+++K +C   R+I + + N+  ++ P+ ICGD+HGQ+ DL+ LF  GG PP  NYLFLGDYVDRG  S+ET  LL+  K +YP+   L
Sbjct:   30 ICETQVKSICAKVREILIEEANVQVIDTPVTICGDIHGQFHDLMELFRVGGSPPNTNYLFLGDYVDRGYNSVETFILLMLLKCRYPDRITL 120          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LSE E++ LC  +++I M + N+  +++P+ ICGD+HGQ+ DL  LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+
Sbjct:   26 LSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ 112          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: BSU1_ARATH (Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 52/97 (53.61%), Postives = 65/97 (67.01%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYP------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            LS  E+K LC     IFM +P LL+L+ P+K+ GD+HGQY DL+RLF   G+P         +YLFLGDYVDRG+ SLE I LL A KI+YP+N  L
Sbjct:  476 LSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKVFGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYPKNIHL 572          
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP4C_MOUSE4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_DROME4.347e-2244.44Serine/threonine-protein phosphatase PP2A OS=Droso... [more]
PP2A1_NEUCR4.347e-2249.43Serine/threonine-protein phosphatase PP2A catalyti... [more]
YSD1_CAEEL5.677e-2253.93Putative serine/threonine-protein phosphatase C23G... [more]
YD44_SCHPO5.677e-2246.43Putative serine/threonine-protein phosphatase C22H... [more]
PP4C2_CAEEL5.677e-2247.25Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_TOBAC5.677e-2250.57Serine/threonine-protein phosphatase PP2A catalyti... [more]
BSU1_ARATH5.677e-2253.61Serine/threonine-protein phosphatase BSU1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
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