CX046305

Overview
NameCX046305
Unique NameCX046305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: Y3816_MYCA1 (Uncharacterized oxidoreductase MAV_3816 OS=Mycobacterium avium (strain 104) GN=MAV_3816 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12
Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 3
Query:  312 EMKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP 674
            E+ G   S   S   LN    +P +GLG  +   +    AV  AL VG R ID A  YGNE  VG A+  +    + R ++F+T+ L  S        +    SL+ LG+ Y+DLYL+HWP
Sbjct:    3 ELTGESGSAAPS-IALNDENTMPVLGLGVAELSDDETERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GIPRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWP 119          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  345 SYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSG 800
            S+  LN G K P    G++      C ++V  AL  GYR+ID A +Y NE + G A+ +  + +  KRED++ TS L   ++      + +  S+K  G+ Y+DL+L+H P      +GD  +                  +WKA+E  V+ G
Sbjct:    4 SFVKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKLN-DLSGYKSTLSSIDASVKACGLGYIDLFLLHSP------YGDRIE------------------SWKALEKGVEEG 131          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: Y3007_MYCPA (Uncharacterized oxidoreductase MAP_3007 OS=Mycobacterium paratuberculosis GN=MAP_3007 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12
Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 3
Query:  315 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP 674
            M G   S   S   LN    +P +GLG  +   +    AV  AL VG R ID A  YGNE  VG A+  +    + R ++F+T+ L  S        +    SL+ LG+ Y+DLYL+HWP
Sbjct:    1 MTGESGSAAPS-IALNDENTMPVLGLGVAELSDDETERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GIPRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWP 116          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTWQT-GGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP 674
            L+ G ++P  GLG ++   G    E+VK A+  GYR+ID A +Y NE  VG  + E+    + RE++F+TS ++               SL+ L + YLDLYL+HWP
Sbjct:   11 LHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWP 114          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDA 704
            LN    +P +GLG  +   +    AV  AL +G R ID A  YGNE  V  A+  +    + R  +F+T+ L        K ++    SL  LG+ Y+DLYL+HWP      + DA
Sbjct:   15 LNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAPPVGQYVDA 127          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDA 704
            LN    +P +GLG  +   +    AV  AL +G R ID A  YGNE  V  A+  +    + R  +F+T+ L        K ++    SL  LG+ Y+DLYL+HWP      + DA
Sbjct:   15 LNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAPPVGQYVDA 127          
The following BLAST results are available for this feature:
BLAST of CX046305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
Y3816_MYCA13.298e-1236.36Uncharacterized oxidoreductase MAV_3816 OS=Mycobac... [more]
YER5_SCHPO5.625e-1230.07Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
Y3007_MYCPA5.625e-1236.67Uncharacterized oxidoreductase MAP_3007 OS=Mycobac... [more]
GR_BACSU1.253e-1137.38Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
Y1669_MYCLE6.220e-1134.48Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB6.220e-1134.48Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7B07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7B07-C13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046305 ID=CX046305; Name=CX046305; organism=Citrus sinensis; type=EST; length=805bp
AAAACGTGAAAAGTAATTCTTTGATTGGTTGGTTGGGTTTGGTCAAAAAA
ATATTTTTTTAATTCTATTTTTGTTGTTTTTCAGTTTCGTGTGGGACTAA
TGCGTCTGTGGGTTTTAAGTCGGGAAGATGATTGAATCTTCATTTGTCTG
CTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTTTAAT
TCTGTCAAAGCTTTGAAGTGAAAAAAAATGCAAACTCTCGTCTGGGTTTT
GTGATTTTTGGTTTGATTTGGTATCTGGGTTTTTGATCTTTTTTTCTTTT
TGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTAC
TTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATG
GCAAACTGGGGGAGAGCTTTGTGTTGAAGCTGTGAAAACAGCATTGTCAG
TGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAA
GTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGA
TGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGA
TTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTG
GATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGA
TGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAA
ATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTAGACTCGGGA
TTGGT
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