CX046305

Overview
NameCX046305
Unique NameCX046305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.022e-18
Identity = 58/160 (36.25%), Postives = 89/160 (55.62%), Query Frame = 3
Query:  336 PGSSYFVLNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            P S    LN G  IP +G GT+   +      +EA K A+ VG+R++D AHLY NE +VG+A+  +   G++KRED+F TS L+C+      +   +  SL+NL + Y+DLY++H P       G+   P  +SG      ++ L   W+A+E   D+GL
Sbjct:    3 PKSQRVKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP--GNKFVPKDESGKLIFDSVD-LCHTWEALEKCKDAGL 159          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.253e-18
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP---------ECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSG 800
            LN G K+P +GLG W+   ++C + +  A+ +GYR  D A  Y NE EVG+ ++ A K G +KRED+ + S L+ S +  + +   +  +L +L + Y+D++ +H+P         E    GF    +  +K   E  Q    L   W+A+E LVD G
Sbjct:   10 LNNGEKMPLVGLGCWKMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIEEEQV--PLLDTWRALEKLVDQG 165          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.253e-18
Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            LN G  +P +G GT+   +      +EA K A+  G+R+ID AHLY NE  VG A+  +   G++KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKNKALEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKP--GEELIPKDENGKLLFDTVD-LCATWEAMEKCKDAGL 159          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1C4_HUMAN (Aldo-keto reductase family 1 member C4 OS=Homo sapiens GN=AKR1C4 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.861e-18
Identity = 56/153 (36.60%), Postives = 85/153 (55.56%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            LN G  +P +G GT+   +      VE  K A+  G+R+ID A+LY NE +VG A+  +   GS+KRED+F TS L+C+      ++  +  SLK L + Y+DLYL+H+P   A   G+   P  ++G      ++ L   W+ ME   D+GL
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFP--MALKPGETPLPKDENGKVIFDTVD-LSATWEVMEKCKDAGL 159          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.170e-17
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSG 800
            LN+G ++P +G G W+       + +  A+  GYR  D A  YGNE EVGE ++ A K G +KRE++F+TS L+ + +    +E  +  +L +L + Y+DL+L+H+P        +   PP     +   F      L   WKA+E LV++G
Sbjct:   12 LNSGYEMPLVGFGCWKVTNATAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAG 163          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.170e-17
Identity = 57/160 (35.62%), Postives = 88/160 (55.00%), Query Frame = 3
Query:  336 PGSSYFVLNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            P S     N G  IP +G GT+   +      +EA K A+ VG+R++D AHLY NE +VG+A+  +   G++KRED+F TS L+C+      +   +  SL+NL + Y+DLY++H P       G+   P  +SG      ++ L   W+A+E   D+GL
Sbjct:    3 PKSQRVKFNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP--GNKFVPKDESGKLIFDSVD-LCHTWEALEKCKDAGL 159          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.170e-17
Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            LN G  +P +G GT+   +      VE  K A+  G+R+ID A+LY NE +VG A+  +   GS+KRED+F TS L+C+      ++  +  SLK L + Y+DLYL+H+P   A   G+   P  ++G      ++ L   W+AME   D+GL
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFP--MALKPGETPLPKDENGKVMFDTVD-LCAIWEAMEKCKDAGL 159          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.528e-17
Identity = 51/120 (42.50%), Postives = 64/120 (53.33%), Query Frame = 3
Query:  342 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGD 701
            S    LN G  IP +GLG WQT  E    AV  AL  GYR+ID A  Y NE E G A+  +    + RED+FL + L+ S    +        S++ LGV YLDLYL+HWP    + F D
Sbjct:    2 SPRITLNDGNSIPQVGLGVWQTPAEDTERAVAAALQAGYRHIDTAAAYRNETETGRAIANS---GVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPENNKFVD 118          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.996e-17
Identity = 49/152 (32.24%), Postives = 84/152 (55.26%), Query Frame = 3
Query:  357 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSG 800
            LN+G ++P++G G W+     C + +  A+ VGYR  D A  YGNE EVGE ++ A  +G + R+++F+ S L+ S +    +E  +  +L +L V YLDL+L+H+P        +   PP     +  +F+     +   W+A+E +V+ G
Sbjct:    5 LNSGYEMPSVGFGCWKVDKATCADTIYNAIKVGYRLFDGAEDYGNEKEVGEGINRALDEGLVARDELFVVSKLWNSFHDPKNVEKALDRTLSDLKVDYLDLFLIHFPIAFKFVPFEEKYPPGFYCGDGDKFIYEGVPIIDTWRALEKMVEKG 156          
BLAST of CX046305 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.996e-17
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  345 SYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP-ECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGL 803
            S   L++G ++P IGLG W+   +   E +  A+ +GYR+ DCA  Y +E +VGEAL EAFK G +KRE++F+T+ ++ S +    +    + SL+ L + YLDLYL+H+P     +  G       +           L++ W+ ME  V  GL
Sbjct:    2 STVTLSSGYEMPVIGLGLWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLVKREELFITTKIWNSDH--GHVVEACKNSLEKLQIDYLDLYLVHYPMPTKHNAIGKTASLLGEDKVLDIDVTISLQQTWEGMEKTVSLGL 154          
The following BLAST results are available for this feature:
BLAST of CX046305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
PGFS1_BOVIN4.022e-1836.25Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
XYL1_KLULA5.253e-1832.91NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
AK1C1_MACFA5.253e-1837.25Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C4_HUMAN6.861e-1836.60Aldo-keto reductase family 1 member C4 OS=Homo sap... [more]
XYL1_CANTR1.170e-1733.55NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
PGFS2_BOVIN1.170e-1735.63Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
AK1C4_MACFA1.170e-1737.25Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
Y2408_MYCS21.528e-1742.50Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
XYL1_PICGU1.996e-1732.24NADPH-dependent D-xylose reductase OS=Pichia guill... [more]
S6PD_MALDO1.996e-1734.84NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_7B07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7B07-C13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046305 ID=CX046305; Name=CX046305; organism=Citrus sinensis; type=EST; length=805bp
AAAACGTGAAAAGTAATTCTTTGATTGGTTGGTTGGGTTTGGTCAAAAAA
ATATTTTTTTAATTCTATTTTTGTTGTTTTTCAGTTTCGTGTGGGACTAA
TGCGTCTGTGGGTTTTAAGTCGGGAAGATGATTGAATCTTCATTTGTCTG
CTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTTTAAT
TCTGTCAAAGCTTTGAAGTGAAAAAAAATGCAAACTCTCGTCTGGGTTTT
GTGATTTTTGGTTTGATTTGGTATCTGGGTTTTTGATCTTTTTTTCTTTT
TGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGAGTAGTTAC
TTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTGGGAACATG
GCAAACTGGGGGAGAGCTTTGTGTTGAAGCTGTGAAAACAGCATTGTCAG
TGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATGAGATTGAA
GTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAGAGAGAGGA
TGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAATCAATAAGA
TTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTTCATATTTG
GATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGTTTTGGGGA
TGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCAGTTTTTAA
ATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTAGACTCGGGA
TTGGT
back to top