CX046285

Overview
NameCX046285
Unique NameCX046285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.510e-18
Identity = 63/190 (33.16%), Postives = 101/190 (53.16%), Query Frame = 3
Query:    3 GIHFFQQASGIDAVVLYSPRIFEKAGIASSDKKL-LATVAVGFV----KTIFIL----VATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            GI   QQ SGI+ V+ Y+P+I E+AG+      L L++++  F+     T+ +L    VA  L+D  GRR LLL ++  +I SL  L IS  +    H   +    L+   V+ Y  FF +G GPI  +  SEI P ++R    +I  MV  +   +V+ +   L  +I + G F +YA++  ++W+F Y
Sbjct:  516 GIQILQQFSGINGVLYYTPQILERAGVDILLSSLGLSSISASFLISGLTTLLMLPAIVVAMRLMDVSGRRSLLLWTIPVLIVSLVVLVISELI----HISKVVNAALSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVY 701          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR2_CHICK (Solute carrier family 2, facilitated glucose transporter member 2 OS=Gallus gallus GN=SLC2A2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.972e-18
Identity = 52/180 (28.89%), Postives = 94/180 (52.22%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            +   QQ SGI+A+  YS  IF++AG+    + + AT+ VG V T+F +++ FL++K GRR L L+ + GM+ S   + + L ++ Q      W   +++  +  +V FF +G GPI W   +E+     R    ++    N   + +V M F  ++  +     F ++A +  V ++F Y
Sbjct:  322 VQISQQFSGINAIFYYSTNIFQRAGVG---QPVYATIGVGVVNTVFTVISVFLVEKAGRRSLFLAGLMGMLISAVAMTVGLVLLSQ----FAWMSYVSMVAIFLFVIFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFCNWACNFIVGMCFQYIAD-LCGPYVFVVFAVLLLVFFLFAY 493          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.972e-18
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTF 461
            QQ SGI+AV  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+L +++Q    + W   L+I  +  +VAFF +G GPI W   +E+     R    ++    N  ++ +V M F
Sbjct:  282 QQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCF 422          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTF 461
            QQ SGI+AV  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+L +++Q    + W   L+I  +  +VAFF +G GPI W   +E+     R    ++    N  ++ +V M F
Sbjct:  180 QQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCF 320          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTF 461
            QQ SGI+AV  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+L +++Q    + W   L+I  +  +VAFF +G GPI W   +E+     R    ++    N  ++ +V M F
Sbjct:  241 QQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCF 381          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASI 518
            +   QQ +G++ ++ Y+P+IFE AG  ++ +++  TV VG    +   +A  L+D+ GR+P L      M A +  L   + +   S     +AI +    +L ++  F++  GP+ WV  SEI PLK R  G +     N + + +V  TFL++   +    +F++YA++
Sbjct:  258 LQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAM----LLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAAL 424          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASI 518
            +   QQ +G++ ++ Y+P+IFE AG  ++ +++  TV VG    +   +A  L+D+ GR+P L      M A +  L   + +   S     +AI +    +L ++  F++  GP+ WV  SEI PLK R  G +     N + + +V  TFL++   +    +F++YA++
Sbjct:  258 LQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAM----LLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAAL 424          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 59/187 (31.55%), Postives = 91/187 (48.66%), Query Frame = 3
Query:    3 GIHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSL-----SKAITIGGSFFLYASIASVAWVFFYT 548
            G+  FQQ  G + V+ Y+P IF   G   S   LLA + +G    I   +A  ++DKI R+ ++     GM  SL  ++I +     S    I    +++  +  Y+AFFS   GP+ WV   E+ PL +R  G S   ++N   + +VS+TF SL     + ++ IG     +ASI  V    F T
Sbjct:  249 GLAIFQQVMGCNTVLYYAPTIFTDVGFGVS-AALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSIGMKFSGGSQTAAI----ISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGTGSLFIGYGILCFASIWFVQKKVFET 430          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 54/180 (30.00%), Postives = 94/180 (52.22%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            +H  QQ SGI+ +  YS  IF+ AGI+   + + AT+ VG +  IF  V+  L++K GRR L L+ + GM      +++ L ++D    K  W   ++++ +  +V+FF IG GPI W   +E      R    ++    N V + V+++ F  ++  +     FFL+A +  V  +F +
Sbjct:  309 LHMAQQFSGINGIFYYSTSIFQTAGIS---QPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLTGMIGMFFCTIFMSVGLVLLD----KFAWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFVIALCFQYIADFLG-PYVFFLFAGVVLVFTLFTF 480          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTF 461
            QQ SGI+AV  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+L +++Q    + W   L+I  +  +VAFF +G GPI W   +E+     R    ++    N  ++ +V M F
Sbjct:  282 QQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCF 422          
The following BLAST results are available for this feature:
BLAST of CX046285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MSSP1_ARATH1.510e-1833.16Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
GTR2_CHICK1.972e-1828.89Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT1.972e-1835.14Solute carrier family 2, facilitated glucose trans... [more]
GTR1_SHEEP2.576e-1835.14Solute carrier family 2, facilitated glucose trans... [more]
GTR1_PIG2.576e-1835.14Solute carrier family 2, facilitated glucose trans... [more]
GALP_ECOLI2.576e-1828.65Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL62.576e-1828.65Galactose-proton symporter OS=Escherichia coli O6 ... [more]
XYLT_LACBR3.365e-1831.55D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
GTR2_MOUSE3.365e-1830.00Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN3.365e-1835.14Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7A06-A11-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046285 ID=CX046285; Name=CX046285; organism=Citrus sinensis; type=EST; length=551bp
TTGGTATTCATTTCTTCCAACAAGCATCCGGCATAGACGCTGTCGTTCTG
TACAGTCCTAGAATCTTTGAAAAAGCTGGGATTGCGTCATCAGACAAAAA
GTTGCTCGCTACTGTAGCCGTTGGATTTGTCAAGACCATTTTCATCCTAG
TGGCTACGTTTTTACTCGACAAAATCGGACGGCGTCCGTTGCTTTTGAGC
AGTGTTGCGGGCATGATCGCCTCGCTCGCGACCCTTGCTATCTCTCTCAC
AGTCATAGATCAGTCACACAAAAAGATGATCTGGGCTATTGGTTTGGCCA
TCTCAACGGTTTTATCCTACGTGGCGTTTTTCTCAATCGGGATGGGTCCC
ATCACGTGGGTTTACAGTTCAGAGATTCTGCCGTTGAAGCTACGCGCTCA
GGGAGCGAGTATCGGGGTCATGGTAAACAGGGTAACAAGTGGGGTCGTAT
CGATGACTTTCCTATCGCTTAGTAAAGCGATCACGATTGGCGGCTCCTTC
TTTCTATACGCGTCAATTGCATCAGTTGCGTGGGTGTTTTTCTACACGTG
T
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