CX046285

Overview
NameCX046285
Unique NameCX046285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR2_BOVIN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Bos taurus GN=SLC2A2 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 6.345e-17
Identity = 48/152 (31.58%), Postives = 81/152 (53.29%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTF 461
            +H  QQ SGI+ +  YS  IF+ AGI+   + + AT+ VG V T+F  V+ FL++K GRR L L  ++GM      +++ L ++     K  W   ++++ +  +V+FF IG GPI W   +E      R    +I    N   + ++++ F
Sbjct:  308 LHAAQQFSGINGIFYYSTSIFQTAGIS---QPVYATIGVGAVNTVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFMSVGLVLL----SKFPWMNYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTGNFIIALCF 452          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.082e-16
Identity = 55/184 (29.89%), Postives = 97/184 (52.72%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---IDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            I FFQQ +GI+ ++ Y+P +F   G  ++D  L++ V  G V     LV+ + +D+ GRR L L     M+   A +A  +     +D +  ++  W   + ++ +  YVA F+   GP+ W+  SEI PL++R+   SI V VN + + +++  FL++   +   G F ++A    V  +F Y
Sbjct:  290 IPFFQQLTGINVIMFYAPVLFNTIGF-TTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKF-GLFLVFAFFVVVMSIFVY 471          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.082e-16
Identity = 55/163 (33.74%), Postives = 85/163 (52.15%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFL 506
            QQ SGI+AV  YS  IF+ AG+   ++ + AT+  G V TIF +V+ FL+++ GRR L +  + GM      + ISL + D  +    W   + I  +L +VAFF IG GPI W   +E+     R    ++    N  ++ +V + F   S A  +G   F+
Sbjct:  280 QQLSGINAVFYYSTGIFKDAGV---EEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKDNYN----WMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLF--PSAAFYLGAYVFI 433          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.846e-16
Identity = 56/189 (29.63%), Postives = 93/189 (49.21%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---------IDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            I FFQQ +GI+ +  Y+P +F+  G  S    LL+ +  G ++ +   V+ F +D+ GRR L L     M+ S   +   + V         I +S   +I A+      +  YVA F+   GP+ W+  SEI PL++R+   +I V VN   + +V+  FL++   +   G FF +A    +  +F Y
Sbjct:  289 IPFFQQLTGINVITFYAPVLFQTLGFGSK-ASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVAL------ICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKF-GLFFFFAFFVVIMTIFIY 469          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.846e-16
Identity = 52/181 (28.73%), Postives = 95/181 (52.49%), Query Frame = 3
Query:    3 GIHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            G+   QQ SG  AV+ Y+  I  KAG + +    + +  +G       ++   L+DK GRRPLLL+SV+GM  +   + ++ T+        +  +   I   L Y+  ++IG+G + WV  SEI P+ ++    SI  +V+  +S +V+  F  L +  T  G+F+++ ++  +A +F +
Sbjct:  276 GLMLIQQFSGSSAVLSYASTILRKAGFSVT----IGSTLLGLFMIPKAMIGVILVDKWGRRPLLLTSVSGMCITSMLIGVAFTLQKMQLLPELTPVFTFICVTL-YIGTYAIGLGGLPWVIMSEIFPMNIKVTAGSIVTLVSWSSSSIVTYAFNFLLEWST-QGTFYVFGAVGGLALLFIW 450          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.411e-16
Identity = 58/182 (31.87%), Postives = 89/182 (48.90%), Query Frame = 3
Query:   15 FQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGM----IASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFYT 548
            FQQ +GI     Y+P +F   G  S    L+AT  +GFV    +L++T ++D+ GRR L ++    M    IA    LA+++        K  +A+ + +   + Y A F    GP++W+  SEI PLK+R  G S+ V VN   +  +S TFL+        G+F  Y       W+F  T
Sbjct:  296 FQQLTGITVNAFYAPVLFRSVGFGSGPA-LIATFILGFVNLGSLLLSTMVIDRFGRRFLFIAGGILMLLCQIAVAVLLAVTVGATGDGEMKKGYAVTVVVLLCI-YAAGFGWSWGPLSWLVPSEIFPLKIRPAGQSLSVAVNFAATFALSQTFLATLCDFKY-GAFLFYG-----GWIFTMT 469          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.411e-16
Identity = 58/175 (33.14%), Postives = 88/175 (50.29%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFF 542
            QQ SGI+AV  YS  IF+ AG+    + + AT+  G V TIF +V+ FL+++ GRR L +  + GM      + ISL + D+          + I  +L YVAFF IG GPI W   +E+     R    ++    N  ++ +V M F   S A  +G   F+  +   V ++ F
Sbjct:  280 QQFSGINAVFYYSTGIFQDAGV---QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLKDEYEAMSF----VCIVAILVYVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMFF--PSAAAYLGAYVFIIFAAFLVFFLIF 445          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16
Identity = 57/183 (31.15%), Postives = 91/183 (49.73%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIAS---LATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            I FFQQ +GI+ ++ Y+P +F+  G A  D  L++ V  G V  +  LV+ + +D+ GRR L L     MI S   + TL         S           ++ +  YVA F+   GP+ W+  SEI PL++R  G +I V VN   + ++   FL++   +   G F+ +  + +V  VF Y
Sbjct:  292 IPFFQQITGINVIMFYAPVLFKTLGFAD-DASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGSGTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKF-GLFYFFGGMVAVMTVFIY 472          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16
Identity = 59/171 (34.50%), Postives = 89/171 (52.05%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQ----SHKKMIWAIGLAISTVLS-YVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFF 503
            I FFQQ +GI+A++ Y P +F   G ASS   LL TV VG V     ++A  L DK GRR LL+    G+   LA LA  +T+  +      + +   +   +  V+  ++A F+   GP+ W+  SEI  L+ R  G ++ VM N + S V+   F+S+  A+  G   F
Sbjct:  294 IQFFQQFTGINAIIFYVPVLFSSLGSASS-AALLNTVVVGAVNVGSTMIAVLLSDKFGRRFLLIEG--GITCCLAMLAAGITLGVEFGQYGTEDLPHPVSAGVLAVICIFIAGFAWSWGPMGWLIPSEIFTLETRPAGTAVAVMGNFLFSFVIGQAFVSMLCAMKFGVFLF 461          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16
Identity = 53/175 (30.29%), Postives = 90/175 (51.43%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFF 542
            QQ SGI+AV  YS  IFE AG+    +   AT+  G V T+F LV+  L+++ GRR L L  +AGM      + ++L ++++          ++I  +  +VAFF IG GPI W   +E+     R    ++    N  ++ ++ M F  +++A  +G   FL  ++  + +  F
Sbjct:  298 QQLSGINAVFYYSTSIFETAGVG---QPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSY----VSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGFQYVAEA--MGPYVFLLFAVLLLGFFIF 463          
The following BLAST results are available for this feature:
BLAST of CX046285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
GTR2_BOVIN6.345e-1731.58Solute carrier family 2, facilitated glucose trans... [more]
STP1_ARATH1.082e-1629.89Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
GTR3_CANFA1.082e-1633.74Solute carrier family 2, facilitated glucose trans... [more]
STP4_ARATH1.846e-1629.63Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
EDL18_ARATH1.846e-1628.73Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
STP5_ARATH2.411e-1631.87Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
GTR3_RAT2.411e-1633.14Solute carrier family 2, facilitated glucose trans... [more]
STP9_ARATH3.149e-1631.15Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
HUP3_CHLKE3.149e-1634.50H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
GTR4_HUMAN3.149e-1630.29Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7A06-A11-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046285 ID=CX046285; Name=CX046285; organism=Citrus sinensis; type=EST; length=551bp
TTGGTATTCATTTCTTCCAACAAGCATCCGGCATAGACGCTGTCGTTCTG
TACAGTCCTAGAATCTTTGAAAAAGCTGGGATTGCGTCATCAGACAAAAA
GTTGCTCGCTACTGTAGCCGTTGGATTTGTCAAGACCATTTTCATCCTAG
TGGCTACGTTTTTACTCGACAAAATCGGACGGCGTCCGTTGCTTTTGAGC
AGTGTTGCGGGCATGATCGCCTCGCTCGCGACCCTTGCTATCTCTCTCAC
AGTCATAGATCAGTCACACAAAAAGATGATCTGGGCTATTGGTTTGGCCA
TCTCAACGGTTTTATCCTACGTGGCGTTTTTCTCAATCGGGATGGGTCCC
ATCACGTGGGTTTACAGTTCAGAGATTCTGCCGTTGAAGCTACGCGCTCA
GGGAGCGAGTATCGGGGTCATGGTAAACAGGGTAACAAGTGGGGTCGTAT
CGATGACTTTCCTATCGCTTAGTAAAGCGATCACGATTGGCGGCTCCTTC
TTTCTATACGCGTCAATTGCATCAGTTGCGTGGGTGTTTTTCTACACGTG
T
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