CX046285

Overview
NameCX046285
Unique NameCX046285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 54/184 (29.35%), Postives = 92/184 (50.00%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---IDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            I FFQQ +GI+ ++ Y+P +F+  G  S D  L++ V  G V     +V+ + +DK GRR L L     M+   A +A  +     +D +   +  W   + +  +  YV+ F+   GP+ W+  SEI PL++R+   S+ V VN   + VV+  FL +   +   G F  ++    +  +F Y
Sbjct:  292 IPFFQQLTGINVIMFYAPVLFDTIGFGS-DAALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKF-GLFIFFSFFVLIMSIFVY 473          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYAS---IASVAWVFF 542
            QQ SGI+AV  YS  IF+ AG+    + + AT+  G V TIF +V+ FL+++ GRR L +  + GM      + +SL + D  +      IG     +L +VAFF IG GPI W   +E+     R    ++    N  ++ +V + F   S A  +G   F+  +   I  +A+ FF
Sbjct:  280 QQLSGINAVFYYSTGIFKDAGV---QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVCIG----AILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLF--PSAAHYLGAYVFIIFTGFLITFLAFTFF 448          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   18 QQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYAS---IASVAWVFF 542
            QQ SGI+AV  YS  IF+ AG+    + + AT+  G V TIF +V+ FL+++ GRR L +  + GM      + +SL + D  +      IG     +L +VAFF IG GPI W   +E+     R    ++    N  ++ +V + F   S A  +G   F+  +   I  +A+ FF
Sbjct:  280 QQLSGINAVFYYSTGIFKDAGV---QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVCIG----AILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLF--PSAAHYLGAYVFIIFTGFLITFLAFTFF 448          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 3
Query:   15 FQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFYT 548
            F Q  G++A+  Y P IF+  G   +    + T  VG V+ IF ++A  L+DK+GR+ L       M    A +AI + +I  S    + +  + I  +L +VA F + +GPITW+  SEI P  LRA+ A I  +     +  +      +  +  +  +F+++A I  + ++F  T
Sbjct:  276 FNQVIGMNAITYYGPEIFKMMGFGQN-AGFVTTCIVGVVEVIFTVIAVLLIDKVGRKKL-------MSIGSAFMAIFMILIGTSFYFELTSGIMMIVLILGFVAAFCVSVGPITWIMISEIFPNHLRARAAGIATIFLWGANWAIGQFVPMMIDSFGLAYTFWIFAVINILCFLFVVT 445          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: EDL11_ARATH (Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.666e-15
Identity = 50/181 (27.62%), Postives = 90/181 (49.72%), Query Frame = 3
Query:    3 GIHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            G+   QQ SG   +  YS  IF KAG +      L ++  G       LV   L+D+ GRRPLLL+S  GM      + +S T+   +    +  I + ++ +L Y   F+ G+G + WV  SEI P+ ++    +I  + +  +   VS  F +     +  G+F+++A++  ++++F +
Sbjct:  271 GLMLIQQLSGASGITYYSNAIFRKAGFSER----LGSMIFGVFVIPKALVGLILVDRWGRRPLLLASAVGMSIGSLLIGVSFTLQQMNVLPELIPIFVFVN-ILVYFGCFAFGIGGLPWVIMSEIFPINIKVSAGTIVALTSWTSGWFVSYAF-NFMFEWSAQGTFYIFAAVGGMSFIFIW 445          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLS-YVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMT 458
            I FFQQ +GI+ V  Y+P ++   G   S   L++T+  G V T   L++  ++D+IGR+ L L     M+ S  T+ + + V D     +    G A+  ++  YVA F    GP+ W+  SEI PL++R+   S+ V V+ V +  V+ +
Sbjct:  295 IPFFQQVTGINVVAFYAPVLYRTVGFGESGS-LMSTLVTGIVGTSSTLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVIVMVADVHDGVIKEGYGYAVVVLVCVYVAGFGWSWGPLGWLVPSEIFPLEIRSVAQSVTVAVSFVFTFAVAQS 445          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15
Identity = 52/167 (31.14%), Postives = 85/167 (50.90%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLL-SSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFF 503
            I FFQQ +GI+ +  Y+P +F   G+  S   LL+++  G V +    ++  ++DK+GRR L +   V   +A +   +I    +            + +  +  YVA F    GP+ W+  SEI PL++R+ G SI V V+ + + VV+ TFLS+      G  FF
Sbjct:  290 IPFFQQVTGINVIAFYAPILFRTIGLEES-ASLLSSIVTGLVGSASTFISMLIVDKLGRRALFIFGGVQMFVAQIMVGSIMAAELGDHGGIGKGYAYIVLILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSMLCHFKSGIFFF 455          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.547e-15
Identity = 54/181 (29.83%), Postives = 92/181 (50.83%), Query Frame = 3
Query:   15 FQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---IDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            FQQ +GI+ ++ Y+P +F+  G  S D  L++ V  G V     +V+ + +DK GRR L L     M+ S   +A ++     +D +   +  W   + +  +  YVA F+   GP+ W+  SEI PL++R+   SI V VN + + +++  FL +   +   G F  +A    V  +F Y
Sbjct:  291 FQQLTGINVIMFYAPVLFQTIGFGS-DAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKF-GLFIFFAFFVVVMSIFVY 469          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15
Identity = 55/188 (29.26%), Postives = 90/188 (47.87%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIG--------LAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 545
            +  FQQ +GI+A++ Y+P +F+  G  S D  LL+ V  G +  +   V  +L+D+ GRR LLL S   M+     + I L        K +   G        + +  V  YV  F+   GP+ W+  SE  PL+ R+ G ++ V  N   + V++  FLS+   +   G FF ++    V  +F +
Sbjct:  286 LQLFQQFTGINAIMFYAPVLFQTVGFGS-DAALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGIILA-------KDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSMLCGMR-SGIFFFFSGWIIVMGLFAF 464          
BLAST of CX046285 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 3
Query:    6 IHFFQQASGIDAVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSS----VAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFF 503
            I FFQQ +GI+A++ Y P +F   G A+S   LL TV VG V     L+A    DK GRR LL+         M+ +   LAI              A G+ ++ +  +++ F+   GP+ W+  SEI  L+ R  G ++ V+ N + S V+   F+S+  A+  G   F
Sbjct:  294 IQFFQQFTGINAIIFYVPVLFSSLGSANS-AALLNTVVVGAVNVGSTLIAVMFSDKFGRRFLLIEGGIQCCLAMLTTGVVLAIEFAKYGTDPLPKAVASGI-LAVICIFISGFAWSWGPMGWLIPSEIFTLETRPAGTAVAVVGNFLFSFVIGQAFVSMLCAMEYGVFLF 461          
The following BLAST results are available for this feature:
BLAST of CX046285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
STC_RICCO1.563e-1529.35Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
GTR3_PONAB1.563e-1532.58Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN1.563e-1532.58Solute carrier family 2, facilitated glucose trans... [more]
ARAE_BACSU1.563e-1529.21Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
EDL11_ARATH2.666e-1527.62Sugar transporter ERD6-like 11 OS=Arabidopsis thal... [more]
STP3_ARATH3.482e-1532.24Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
HEX6_RICCO3.482e-1531.14Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
STP12_ARATH4.547e-1529.83Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STP6_ARATH7.756e-1529.26Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
HUP1_CHLKE7.756e-1532.35H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7A06-A11-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046285 ID=CX046285; Name=CX046285; organism=Citrus sinensis; type=EST; length=551bp
TTGGTATTCATTTCTTCCAACAAGCATCCGGCATAGACGCTGTCGTTCTG
TACAGTCCTAGAATCTTTGAAAAAGCTGGGATTGCGTCATCAGACAAAAA
GTTGCTCGCTACTGTAGCCGTTGGATTTGTCAAGACCATTTTCATCCTAG
TGGCTACGTTTTTACTCGACAAAATCGGACGGCGTCCGTTGCTTTTGAGC
AGTGTTGCGGGCATGATCGCCTCGCTCGCGACCCTTGCTATCTCTCTCAC
AGTCATAGATCAGTCACACAAAAAGATGATCTGGGCTATTGGTTTGGCCA
TCTCAACGGTTTTATCCTACGTGGCGTTTTTCTCAATCGGGATGGGTCCC
ATCACGTGGGTTTACAGTTCAGAGATTCTGCCGTTGAAGCTACGCGCTCA
GGGAGCGAGTATCGGGGTCATGGTAAACAGGGTAACAAGTGGGGTCGTAT
CGATGACTTTCCTATCGCTTAGTAAAGCGATCACGATTGGCGGCTCCTTC
TTTCTATACGCGTCAATTGCATCAGTTGCGTGGGTGTTTTTCTACACGTG
T
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